Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0954 ATGGAGGAATACAACACTAATAATAATAGTACTAGTAATAATCACTTGAGCGAAAACACAGGTCCAACAAGGCCAAGTTTCTTGTACTCTTCAACAACCACTAGTACTACTAGTGCTTCTTCTTCTTCTTCTCTTGGTGTTTTTGGAAGAACCATTAATTATAATGGTGAAAACAACAATCATCATGATCATAATCAAGTTCCAAATATAAACACTTTTCATCTCCAATCTAGTGGTGGTGGTGGATCAGATCATAATCACAATCATAATCAAAATCATCATCAATTTCATTCTGATCAAATTCCACAACTCCTTCACCCTTCAGTGAAGACAGAAACAAGCACTTCTCATCATAATCATAATCCAATTCTTCATCACTACCCTAATTTGTTGAGAGGAAATCTTCAAAATAACACATCAACTACTATGAATCATCCTCACCATAGCCAGCTACACCAGCAAGGAGGGAATCAAAGCTCATCATCAAGCTCTGAACTTGAAGCAATCAAAGCCAAAATCATTGCTCATCCTCACTACTCTAATCTCTTACAAGCTTACATGGATTGCCAAAAGGTTGGAGCTCCACCGGAAGTGGTGGCGCGTTTGGTGGCAGCGAGGCAAGAATTTGAGGCACGGCAACGATCTTCTGTTAGTAACTCAAGGGAAAGTTCCAATAAGGACCCAGAACTTGACCAATTCATGGAAGCATACTATGACATGCTTGTGAAGTATAGAGAAGAATTAACAAGGCCTATTCAAGAGGCTATGGATTTCATGAGAAGGATTGAAACACAACTAAATATGCTTTGCAATGGACCTGTAAGAATCTTCTCAGATGATAAATGCGAAGGCGTTGGTTCGTCGGAAGATGATCAAGACAACAGCGGCGGCGAAGCAGAACTGCCCGAGATTGATCCTCGGGCAGAAGACCGCGAACTGAAGAACCACTTGCTGAGGAAATACAGTGGTTACTTGAGTAGCCTGAAGCAAGAGCTTTCAAAGAAGAAGAAGAAAGGAAAACTTCCTAAAGAAGCCAGGCAAAAGCTACTCAATTGGTGGGAGTTGCATTACAAATGGCCATATCCTTCGGAGTCAGAGAAGGTGGCATTGGCTGAATCAACCGGTTTGGACCAGAAGCAAATAAATAATTGGTTCATAAATCAAAGGAAGAGGCATTGGAAACCCTCTGAGGACATGCAATTCATGGTGATGGATGGCCTTCATGCTCAGAATGCAACACTCTTTATGGATAATGGTCACTACAATATGGCTGATCATACTCACTACCGTCTTGCCCCATGA 1302 0.4109 MEEYNTNNNSTSNNHLSENTGPTRPSFLYSSTTTSTTSASSSSSLGVFGRTINYNGENNNHHDHNQVPNINTFHLQSSGGGGSDHNHNHNQNHHQFHSDQIPQLLHPSVKTETSTSHHNHNPILHHYPNLLRGNLQNNTSTTMNHPHHSQLHQQGGNQSSSSSSELEAIKAKIIAHPHYSNLLQAYMDCQKVGAPPEVVARLVAARQEFEARQRSSVSNSRESSNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLCNGPVRIFSDDKCEGVGSSEDDQDNSGGEAELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHAQNATLFMDNGHYNMADHTHYRLAP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0954 433 ProSiteProfiles ELK domain profile. 312 332 IPR005539 GO:0003677
Aev07g0954 433 MobiDBLite consensus disorder prediction 281 309 - -
Aev07g0954 433 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 1 422 - -
Aev07g0954 433 Pfam Homeobox KN domain 352 391 IPR008422 GO:0003677|GO:0006355
Aev07g0954 433 MobiDBLite consensus disorder prediction 130 165 - -
Aev07g0954 433 CDD homeodomain 344 396 IPR001356 GO:0003677
Aev07g0954 433 SMART HOX_1 334 399 IPR001356 GO:0003677
Aev07g0954 433 Pfam ELK domain 312 333 IPR005539 GO:0003677
Aev07g0954 433 SMART KNOX1_2 167 211 IPR005540 GO:0003677|GO:0005634
Aev07g0954 433 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 422 - -
Aev07g0954 433 MobiDBLite consensus disorder prediction 73 95 - -
Aev07g0954 433 Pfam KNOX1 domain 168 210 IPR005540 GO:0003677|GO:0005634
Aev07g0954 433 SUPERFAMILY Homeodomain-like 333 406 IPR009057 -
Aev07g0954 433 MobiDBLite consensus disorder prediction 1 46 - -
Aev07g0954 433 MobiDBLite consensus disorder prediction 131 165 - -
Aev07g0954 433 ProSitePatterns 'Homeobox' domain signature. 370 393 IPR017970 GO:0000981|GO:0006355
Aev07g0954 433 Gene3D - 329 402 - -
Aev07g0954 433 SMART KNOX2_2 220 271 IPR005541 GO:0003677|GO:0005634
Aev07g0954 433 Pfam KNOX2 domain 225 270 IPR005541 GO:0003677|GO:0005634
Aev07g0954 433 ProSiteProfiles 'Homeobox' domain profile. 332 395 IPR001356 GO:0003677
Aev07g0954 433 MobiDBLite consensus disorder prediction 209 228 - -
Aev07g0954 433 SMART ELK_2 312 333 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0954 Aev-Chr7 6903859 6913296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0954 1 433 Homeobox Transcription Factor Family AT4G08150 58.072 2.12e-146 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Aev07g0954 KNOX2 4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0954 - - gmx:100807602 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0954 07 6903859 6913296 Aev07g0954 07 6903859 6913296 ECH