Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0431 ATGTTGAATCATGTGAGCAATAATAATGGATGCTCATGGCTGTTGTTTGTAGTGAGGTGCTACTCTAGAATTCAACCCCCAAGGCCTGTTTCTGTTGAACCAGTAATCAGAGTATCTAACAATATTGCCCGTCTGGATGCTCCCAAAGAAGGTCCAAAACCCAGACAGCTACTATCATTGCCGCCTTTTCCTGGTCACCCCTTGCCTGACAAGAGCTCAATTACTGGTACTCGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTATTTCAAGGGCACATGGGGTTCTGTCATTGAATCCCATTTCAGGGAGGGTCTAGTGCAAATGGAGAACCTAATTGCTGATGACTCTTCCAGTCAGAAAAAAGAGCCGATGAAACCAATGCGAAAGATTAAACCTAATGAAGTGATCAAACGTGGTGCCAGAGTTCATGTACCTGTATCAATTGTTGAGACTAGGATTTCCAAAAGATATGATGCTATTCCTAGTGGAACACTATATCCAAATGCTGATGAAATTAAGTATCTGCAAAGGCTGGACTCAGCTATTATTGTGCTAAATAAACCTCCAAAATTGCCGGTTAAGGGGAGTTTGCCAGTTCATAATAGCATGGATGCTTTGGCAGCTGTGGCACTATCCTATGATTATGATGAGGGTCCTAAACTGGTTCATCGTCTTGACAGAGAGAGCAGTGGCATCCTTTTACTGGGGAGAACTAAAGATAGTGTATCTCATCTCCAATGGTTGTTCAGTAACATTAACAATGCAAAATCTTCTTGTAAGGCTTGGAATGATGCATATGAAGCTACATATCAGAGGTATTGGGCATTAGTCATAGGGACTCCCAAGGAGAAGGAAGGCATAATTCATGCTCCTCTTTCTAAGGTGGTTCTAGATGATGGAAAGACTGAGAGGGTAATACTAGCTCACCATTCGAGTGTAGAACCTCGCCAAGACGCTATAACTGAGTATCGGGTGCTTGGTCCAAAGATAAATGGATGCTCATGGGTTGAGCTGCGTCCACTCACTTACCGGAAACATCAGCCGATGGAAACAAATGCCGCGAGTCGATATCGAGCCAACAACCGGAAAACCATACAAGTTGCGGAGGCCAGAAGGCCTAGATGTTCAGAAGGGGAGTGTTTTATCAAAGAAGAACTGCACACTTCACTTAGAGAGCAGCCTGATGTTCTTCGCTTTGTGGCAACAATGCCTTCGCATATGAGAATTAGTTGGAATCTCATGTCTTCGTATTTAGTCTGA 1272 0.4332 MLNHVSNNNGCSWLLFVVRCYSRIQPPRPVSVEPVIRVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSITGTRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMENLIADDSSSQKKEPMKPMRKIKPNEVIKRGARVHVPVSIVETRISKRYDAIPSGTLYPNADEIKYLQRLDSAIIVLNKPPKLPVKGSLPVHNSMDALAAVALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKAWNDAYEATYQRYWALVIGTPKEKEGIIHAPLSKVVLDDGKTERVILAHHSSVEPRQDAITEYRVLGPKINGCSWVELRPLTYRKHQPMETNAASRYRANNRKTIQVAEARRPRCSEGECFIKEELHTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0431 423 SUPERFAMILY Pseudouridine synthase 183 351 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aed6g0431 423 MobiDBLite consensus disorder prediction 46 75 - -
Aed6g0431 423 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 13 351 - -
Aed6g0431 423 PANTHER RNA PSEUDOURIDINE SYNTHASE 3, MITOCHONDRIAL 13 351 - -
Aed6g0431 423 CDD PseudoU_synth_RluA_like 186 351 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aed6g0431 423 Pfam RNA pseudouridylate synthase 186 351 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aed6g0431 423 Gene3D Pseudouridine synthase 170 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0431 Aed-Chr6 3795913 3801789 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0431 - - gmx:100817786 706.057