Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0430 ATGAAGAGGTTCTCTGTCTGCTGCTTCACAAGCATAATCTCTAAGTTTCACTCTCACCGGAAGCATAACCAATCTCAGTCTCAGTCTCAGTCTCAGATAATGGCAGGAAACATCTCTGGTTCAAGTGGGAGCAAGGGTGCTAATATTTTACTTAATCATGACTTCTCTAGTGGGCTAAGCTCTTGGCATCTCAATAGCTGCACTGGCTATGTAATTTCAGCTGAATCAGGTACTCGAGGAGTGGAGTCGGATGTTAATTATGCTGTTATCACCGACCGAAAGGAATGCTGGCAAGGTCTTGAGCAAGACATCACCAACAGAATTTCCATTGGTTCCACTTATGTGGTTTCGGCTTGTGTGGGAGTTTCTGGGCTTTCTCAGGGATCTAGTGATGTTCTAGCTACTCTGAAGCTAGACTATCATGATTCAGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTAATAAGGATAGCTGGGAAAAGTTGGAAGGGACATTCTCATTGTCAACTATGCCAGATCGGGTTATATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACATGCTTATACGACCAGTAGAGATCAACTGTTCCACTCCAACTAATAATACCACAAGCACGGGAAGATGTGTTTTGGCTGGAGATGACAACATCATAATCAACCCCCAATTTGATGATGGGCTGAATAACTGGTCTGGAAGAAGCTGCAAGATTATGGTGCATGATTCCATGAATGATGGGAAAATTGTTCCAAAGTCCGGGAAATTCTTTGCATCTGCAACAGAACGCACACAAATCTGGAACGGAATTCAGCAAGAGATCACTGGACGCGTGCAGCGCAAGCTGGCCTATGAGGTCACTGCTCTAGTTAGAATATTTGGAAACAATGTCTCTACTGCTGATTTACGGGCTACTTTGTGGGTGCAAACACCAGATCTCCGAGACCAGTATATTGGCATTGCAAATGTGCAGGCAACAGATAAGGATTGGGTTACAATGCAGGGAAAATTCCTTCTAAATGGTTCTCCATCAAAAGTGGTCCTTTATTTAGAGGGCCCCCCTCCAGGCATTGACATTCTTCTCAATAATTTGGTCTTAAAGCATGCAGCTAAAACACCTCCTTCAACCCCACCGGATGTAAAGAGTGTTGCTTTTGGGGTTAATATAATTGAGAACAGCAATCTGTCTGATAGCACAAATGGATGGTTTCCCCTTGGCAATTGCACTTTGAGTGTTAAAACTGGTTCACCACATATAGTTCCACCAATGGCAAGAGATTCTCTTGGTCCTCATGAGCTCCTAAGTGGGCGCTACATCCTTGTAACTAATCGAACACAAACATGGATGGGTCCGGCTCAGATCATCACCGATAAAGTGAAACTCTTTGTGACTTATCAAGTGTCTGCTTGGGTCCGGATTGGCTCGGGATCATCGTCAGGGCCACAGAGTGTGAATGTTGCCCTTGGTGTTGATAACCAGTGGGTCAATGGAGGACAAACCGAGGTTTCTGATGACATGTGGCATGAAATCGGAGGGTCCTTTAGAATTGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTTCTGGTGTGGACTTCATGGTTGCTGGGCTTCAAATTTTTCCCGTGGACAGACACACAAGGTTTAGATATTTAAAGATCCAAACTGATAAGATCCGCAAACGTGATGTTATGCTGAAATTCTCAGGGCTGGACTCTGGCAGCTACGCAAACACCTCAGTGCAAGTCAGACAAACACAGAATGATTTCCCAATTGGAACATGCATCAGCAGAACAAACATTGACAATGAGGACTTTGTCAACTTCCTTGTGAAGCATTTTAACTGGGCCGTGTTTGGAAACGAGTTGAAGTGGTACTGGACTGAGCCACAACAGGGGAATTTCAACTACAAGGATGCTGATGATCTCTTAAGCTTGTGTGAGAAGCACAAGATTCAGACTCGCGGCCACTGCATCTTCTGGGACGTGGATGAAACCGTTCAGCAGTGGATCAAGTCGCTGAACAAGAATGATTTGATGATGGCTGTCCAGAACCGCCTAAACGGTCTTCTGACTCGCTACAAGGGCAAGTTCAGCCACTATGATGTCAACAACGAAATGCTGCATGGCTCGTTCTACCAAGACAGGCTAGGCAAGGACATAAGGGCAAACATGTTCAAAACTGCAAACCAACTAGACCCTTCTGCCACACTCTTTGTGAACGATTACCACGTTGAAGATGGATGTGACACCAAGTCGTGTCCGGATAAGTACATCCATCACATTCTTGATTTGCAAGAGCAAGGTGCCCCGGTTGGGGGAATCGGAATTCAAGGCCACATAGATAGTCCAGTAGGGCCCGTGGTTAGCTCCTCCCTTGACAAATTGGGAATTCTTGGTCTACCTATATGGTTCACCGAGCTCGACGTGTCTTCCATCAATGAACATGTCAGAGCCGATGATCTTGAAGTTATGCTACGCGAAGCGATGGCTCATCCTGTGGTCGAAGGCATAATGCTGTGGGGATTCTGGGAATTGTTCATGAGTAGGGACAATTCACACTTGGTGAATGCTGAAGGTGACATCAATGAGGCTGGGAAAAGGTTCTTAGCTCTAAAACAAGAGTGGCTCTCTCACAGCCGTGGCCACGTCGATGAACAAGGCCAATACAAACTCAGAGGCTTTCATGGAACGTACAATGTGCAAGTTGTGACCCCTTCAAAGAAAATTTCCAAGACATTTGTGGTTGACAAAGGTGACTCGCCACTTGTGGTATCAATTGATTTGTAA 2802 0.4522 MKRFSVCCFTSIISKFHSHRKHNQSQSQSQSQIMAGNISGSSGSKGANILLNHDFSSGLSSWHLNSCTGYVISAESGTRGVESDVNYAVITDRKECWQGLEQDITNRISIGSTYVVSACVGVSGLSQGSSDVLATLKLDYHDSATSYLFIGRTSVNKDSWEKLEGTFSLSTMPDRVIFYLEGPAPGVDMLIRPVEINCSTPTNNTTSTGRCVLAGDDNIIINPQFDDGLNNWSGRSCKIMVHDSMNDGKIVPKSGKFFASATERTQIWNGIQQEITGRVQRKLAYEVTALVRIFGNNVSTADLRATLWVQTPDLRDQYIGIANVQATDKDWVTMQGKFLLNGSPSKVVLYLEGPPPGIDILLNNLVLKHAAKTPPSTPPDVKSVAFGVNIIENSNLSDSTNGWFPLGNCTLSVKTGSPHIVPPMARDSLGPHELLSGRYILVTNRTQTWMGPAQIITDKVKLFVTYQVSAWVRIGSGSSSGPQSVNVALGVDNQWVNGGQTEVSDDMWHEIGGSFRIEKQPSKVMVYVQGPASGVDFMVAGLQIFPVDRHTRFRYLKIQTDKIRKRDVMLKFSGLDSGSYANTSVQVRQTQNDFPIGTCISRTNIDNEDFVNFLVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLSLCEKHKIQTRGHCIFWDVDETVQQWIKSLNKNDLMMAVQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGCDTKSCPDKYIHHILDLQEQGAPVGGIGIQGHIDSPVGPVVSSSLDKLGILGLPIWFTELDVSSINEHVRADDLEVMLREAMAHPVVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRFLALKQEWLSHSRGHVDEQGQYKLRGFHGTYNVQVVTPSKKISKTFVVDKGDSPLVVSIDL 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0430 933 SUPERFAMILY Galactose-binding domain-like 387 549 IPR008979 -
Aed6g0430 933 Pfam Carbohydrate binding domain 389 533 IPR003305 GO:0016798
Aed6g0430 933 Pfam Carbohydrate binding domain 47 185 IPR003305 GO:0016798
Aed6g0430 933 Pfam Carbohydrate binding domain 217 354 IPR003305 GO:0016798
Aed6g0430 933 SUPERFAMILY Galactose-binding domain-like 216 370 IPR008979 -
Aed6g0430 933 PANTHER - 39 193 - -
Aed6g0430 933 Pfam Glycosyl hydrolase family 10 590 847 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 Gene3D - 41 197 - -
Aed6g0430 933 Gene3D - 385 545 - -
Aed6g0430 933 Gene3D - 213 370 - -
Aed6g0430 933 PRINTS Glycosyl hydrolase family 10 signature 658 670 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 PRINTS Glycosyl hydrolase family 10 signature 772 784 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 PRINTS Glycosyl hydrolase family 10 signature 740 751 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 SUPERFAMILY (Trans)glycosidases 581 884 IPR017853 -
Aed6g0430 933 PANTHER GLYCOSYL HYDROLASE 39 193 IPR044846 GO:0004553|GO:0005975
Aed6g0430 933 PANTHER GLYCOSYL HYDROLASE 210 933 IPR044846 GO:0004553|GO:0005975
Aed6g0430 933 SUPERFAMILY Galactose-binding domain-like 46 198 IPR008979 -
Aed6g0430 933 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 581 876 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 PANTHER - 210 933 - -
Aed6g0430 933 SMART glyco_10 627 877 IPR001000 GO:0004553|GO:0005975
Aed6g0430 933 Gene3D Glycosidases 579 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0430 Aed-Chr6 3788502 3794103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0430 1 933 Glycoside Hydrolase AT1G58370 66.387 0.0 1322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0430 - - gmx:100816678 1726.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0430 6 3788502 3794103 Aed6g0430 6 3788502 3794103 ECH