Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0418 ATGGGGGGTCAGGAAAATGCAATGGGGTTTCAACATGGAAATGAGAGCATTCTGACTTGTCCAACTTCTGGTCTCAGTGGTGCAAATGTTAATGTTTCAGAAATGGCTATTAGTTCTGTGTCTATGGCCAAGCCTTCAGATGTTGTAGCTAATAACCCTTTTCTTGCTTCTTCCTCCGCTTGGGATCCACTTGTTTCCTTGAGCCAGGCTCAAACTTTTGGAGGCTCTTCAATGGTTTCTCATAGTGACTTTGCCAATGCCAACTCATCTTACCCTCTTGTATTGGAAAACCAAGGGCTTAGCAACACTTCACACCTTGTTCAGTACATGTCTGACTCAAATCTTGGGGGCATGGTCACCAAGGTGGTTCACTCCTATGCAAGTGGTGGAGGGTTCTCAGAAATGGTTGGTGCTGCTGGCTCTTTTGGCCAACATGGGTCTGGTGATTTGGCTAACACAGTGTATCCAACACATTATAATCCCATCAAGGAGGCTCCAATTATTAATGGTGAAAAATCTCAGAATGCTGAGGGTGATGCTGTGAAAGATTCTCCCGGGAAGGCCTCTGATGGTCCAAAAGAACATGAAAAGAAACCAAAAGTGGAGCAGAATATTGGTGCAGATGTGCGTGGTAAGCAATCAGTGAAGCAAGCTAAAGACAACAACAATTCTCAAAGTGGAGAAGCTCCCAAAGATAATTTCATTCACGTGAGAAGAGAAAAGATTAGTGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAAGCTGTGATGCTTGATGAGATAATAAATTACGTGCAATCACTTCAGCAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCAGAACTGAACTTTGATGTAGACAGGATCCTATCCAAGGATATTCTCCAATCACGCTTAAGTCATGGAATTGGTGCATATGGTCCCGGTATCAATTCCTCTCACGCATTCCCGAATGGAAGTTTCCATGGAACATTGGCTGGCATGCCTAGTACATCTTCACAATTCCCTTCTTTGCCCCAGAATGTTTTGGACCACGAGTTCCAAAGCTTCTATGGAATTGGATACGATTCTAATACAGCACTTGACAACTTGGGACCCAATGGGCGGTTGAAAACAGAGTTATAG 1161 0.4384 MGGQENAMGFQHGNESILTCPTSGLSGANVNVSEMAISSVSMAKPSDVVANNPFLASSSAWDPLVSLSQAQTFGGSSMVSHSDFANANSSYPLVLENQGLSNTSHLVQYMSDSNLGGMVTKVVHSYASGGGFSEMVGAAGSFGQHGSGDLANTVYPTHYNPIKEAPIINGEKSQNAEGDAVKDSPGKASDGPKEHEKKPKVEQNIGADVRGKQSVKQAKDNNNSQSGEAPKDNFIHVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQSRLSHGIGAYGPGINSSHAFPNGSFHGTLAGMPSTSSQFPSLPQNVLDHEFQSFYGIGYDSNTALDNLGPNGRLKTEL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0418 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 276 IPR011598 GO:0046983
Aed6g0418 386 MobiDBLite consensus disorder prediction 216 230 - -
Aed6g0418 386 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 173 386 IPR024097 GO:0006355
Aed6g0418 386 MobiDBLite consensus disorder prediction 183 205 - -
Aed6g0418 386 Gene3D - 236 297 IPR036638 GO:0046983
Aed6g0418 386 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 174 - -
Aed6g0418 386 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 174 IPR024097 GO:0006355
Aed6g0418 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 294 IPR036638 GO:0046983
Aed6g0418 386 SMART finulus 237 282 IPR011598 GO:0046983
Aed6g0418 386 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 173 386 - -
Aed6g0418 386 MobiDBLite consensus disorder prediction 165 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0418 Aed-Chr6 3647601 3650577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0418 1 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 37.500 8.76e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0418 - - gmx:100794464 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0418 6 3647601 3650577 Aed6g0418 6 3647601 3650577 ECH