Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0415 ATGAAGTCCATGAATGATAGCAACACCGATGATGATGGGAACAATCATAACAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGATGTTACTTCTTCTGGTGTCTCTCCCCACCACCATCATCATCACTACTATCATCACCCTCAGGCTTCTACTGCAACAGCAGCTTGCAACAACAACAACACTGTTCCCACTAACTTCTATATGTCACCCTCACACCTCAACACCTCAGGAATCTGTAGTTATGGTGTTGGAGAAAACAGTGCCTTTCACTCTCCTTTGGCCATGATGCCTCTCAAGTCAGATGGCTCACTTTGCATTATGGAAGCTCTCACCAGATCACAAACCCAAGTGATGGTGCCAACTTCATCTCCAAAACTTGAGGACTTCCTAGGTGGTGCAACTATGGGGGCTGAAGACTATGGAAGCCACCACGAAAGAGAAGCAATGGCTCTAAGCCTAGACAGCATCTACTATAGCAACCAGAATGCTCATGAAACTGAGACCAACGGAGACCATTCCTCTTCTTTGGACCTTCTCTCTGACCCTTTCAGACAACAAAACCATCCATATTACTCAGGGCTTGGGATTTACCAACTGGAGGAAGAACAGACCAAGGAACCGCCACCCCAAATGCCTCAAGTGTCCCTAAGTTTGTCTATGAGCCCTGGCTCTCAATCAAGCTGTGTCACTGTTCCAACTAAGATCTCATCTTCTGGAACTGACTCAGTGCCTGTGGATGCCAAAAAGAGAGGCTCTGCTAAGCTTGGCCAGAAGCAACCTGTGCACAGGAAATCCATTGACACTTTCGGCCAAAGAACTTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCTCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGGTGGTTATGACATGGAAGAGAAAGCTGCAAGAGCTTATGATCTTGCGGCTCTCAAGTATTGGGGACCTTCAACACACATAAACTTCCCGCTAGAAAATTACCAAACTCAACTTGAAGAAATGAAGAATATGAGTAGGCAGGAATACGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCCTCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGCAGGTGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGCACTCAAGAAGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTCCGTGGGGTGAATGCTGTGACCAACTTTGACATAACAAGATACGATGTTGAGAGAATCATGGCCAGCAACACCCTTCTTGCGGGGGAGCTAGCTAGAAGAAACAAGAACAGTGGTGGTGGTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGTAGGATCTAGCCAGCAGCAGGGTTGCATGATTGGTGATGAGTCTATAACTAAGATAGGGACTCATTTTTCAAACCCTTCCTCTCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGCCAGCCCTGATCACAAAACTGGCCCCACTTTGCTTTTTCCAAGGCCTCCAATGGGAGGAGGAGGATCATCAAAGATTGTCACTACTAGCCCTACTATTACTAGTGGCTCTTGGTTTCCCTCTCAAATGAGGCCACTCTCATCTCACTTGCCAGTTTTTGCAGCTTGGAGTGATATCTAG 1734 0.4648 MKSMNDSNTDDDGNNHNNWLGFSLSPHMKMDVTSSGVSPHHHHHHYYHHPQASTATAACNNNNTVPTNFYMSPSHLNTSGICSYGVGENSAFHSPLAMMPLKSDGSLCIMEALTRSQTQVMVPTSSPKLEDFLGGATMGAEDYGSHHEREAMALSLDSIYYSNQNAHETETNGDHSSSLDLLSDPFRQQNHPYYSGLGIYQLEEEQTKEPPPQMPQVSLSLSMSPGSQSSCVTVPTKISSSGTDSVPVDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTQLEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDITRYDVERIMASNTLLAGELARRNKNSGGGAFSVSLQDLIGIDSVVGSSQQQGCMIGDESITKIGTHFSNPSSLVTSLSSSREASPDHKTGPTLLFPRPPMGGGGSSKIVTTSPTITSGSWFPSQMRPLSSHLPVFAAWSDI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 218 462 - -
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 466 575 - -
Aed6g0415 577 SMART rav1_2 278 347 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 SMART rav1_2 377 441 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 SUPERFAMILY DNA-binding domain 376 436 IPR016177 GO:0003677
Aed6g0415 577 CDD AP2 376 437 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 ProSiteProfiles AP2/ERF domain profile. 377 435 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 SUPERFAMILY DNA-binding domain 277 343 IPR016177 GO:0003677
Aed6g0415 577 CDD AP2 277 341 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 MobiDBLite consensus disorder prediction 510 541 - -
Aed6g0415 577 ProSiteProfiles AP2/ERF domain profile. 278 341 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 192 - -
Aed6g0415 577 PRINTS Ethylene responsive element binding protein signature 417 437 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 PRINTS Ethylene responsive element binding protein signature 279 290 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 Pfam AP2 domain 278 333 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 Pfam AP2 domain 378 427 IPR001471 GO:0003700|GO:0006355
Aed6g0415 577 Gene3D AP2/ERF domain 377 437 IPR036955 GO:0003700|GO:0006355
Aed6g0415 577 Gene3D AP2/ERF domain 277 343 IPR036955 GO:0003700|GO:0006355
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 466 575 - -
Aed6g0415 577 MobiDBLite consensus disorder prediction 205 266 - -
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 218 462 - -
Aed6g0415 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 192 - -
Aed6g0415 577 MobiDBLite consensus disorder prediction 211 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0415 Aed-Chr6 3592570 3596201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0415 1 462 AP2-EREBP Transcription Factor Family AT4G37750 54.902 5.92e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aed6g0415 AP2 3.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0415 K09285 - pvy:116131557 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0415 6 3592570 3596201 Aed6g0415 6 3592570 3596201 ECH
Aed6g0415 6 3592570 3596201 Aed4g1609 4 20832257 20836367 PCT