Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0411 ATGGCCAATAATTCTCAACCCTCCAGCATGCAGTTTCGGCCAGTCATTCAAGCCCAGCAAGGGCAACCATTTGTTCCAATGAATTCACAACAATTTGGTCCTGCAGGACATGCTATTCCTTCTTCAAATGTGGGAATGCCTGTCATTCAAGGTCAACAATTGCAGTATTCTCAACCAATGCAGCAGTTGACTCCAAGACCAATGCAGCCTGGTCATCCCTCTTCTTCATCACAAGCTATATCTATGCAATATATTCAGACAAACCGCCCACTGACATCCATTCCACCACATTCACAGCAAACTGGCCCCCCTTTAAGCAATCATATGCCTGGCTTGGGTGTTTCAGTAGGAGCTCCTCATTCTTCATATACTTTCTCACTATCTTATGGTCAGCAGCAAGATAATGCAAATGCATTAGCTCAATACCAGCATCCACCTCAAATGTTTGCTCCTCCTGCTGGTCAACCTTGGCCATCCTCTGTATCTCAGAGTGTTGTGCCTGTTACATCTGTGCAGCCAGCTGGGGTGCAATCATCTGGTGCTACATCAACTGATGCAGCAACTAATGCTACTAACCAGCAATCCTTATCTGATTGGCAAGAGCACACTTCTGGTGATGGGAGAAGATATTATTACAACAAGAGGACAAGGCAATCAAGTTGGGAGAAACCTTTGGAATTGATGTCACCTATAGAGAGAGCTGATGCATCAACTGTTTGGAAAGAATTCACTTCTTCAGAAGGAAGAAAGTATTATTTCAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGATCTTAAGTTGGCTCGTGAGCAGGCACAGAAAGCTGCAAACCAGGGAATGCAGTCAGAAACAAATGATACATCCAATACTGTAGTCTCCTCAACACCAACGTCAACAGCAGCTAATGCAGCTAACACTTCCTTGACATCAAATGGGCTTGCTTCCAGCCCATCTTCTGTCACACCAATTGCAGCTACTGATTCTCAGCAGTCAGTTTCTTGTTTATCTGGGACCTCTGTTACCCACTCTATAGTTACCACAAGCAGCACAGGAGTAGAACCAAGCACTGTGGTAACTACGAGTGCTACACCTACAATAGTTGCAGGAAGCTCTGGGCTAGCAGATAATTCACCCCAACAATCCAAAATGCCTGTGTATAAAACTCTTGTTGAAAATCAAGCATCTCAAGATTTTGCTTCTGCAAATGGATCTTCTCTTCAAGATATCGAGGAAGCCAAAAGACCATTGCCTGTGGTTGGAAAAAATAATGTGATTCTACCTGAAGAGAAAACCAATGACGATGAAACCTTTGTATATGCAAATAAACTGGAAGCAAAAAATGCATTTAAGGCACTTTTGGAATCTGTGAATGTTCAGTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAACGACAAAAGATATAATGCCCTAAAAACACTTGGTGAGCGAAAACAGGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTGGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCCCGTGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTTACATCATCCATGAGGTGGAGCAAAGCTGTTAGTATGTTTGAAAATGATGAACGATTCAATGCTGTTGAAAGACCAAGGGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGGAAGGAAAAGGAAAAGGCTGCTGAGGAACACAGGCGGAGTATAGCTGAGTATAGAAAATTCCTGGAGTCCTGTGACTATGTAAAGGTGAATAGTCCTTGGCGAAAAATCCAAGATCGATTAGAGGATGATGATAGATACTTGCGACTTGAAAAAATTGACCGCTTGCTAGTTTTCCAGGACTATATTCGAGACTTGGAGAAAGAAGAAGAGGAACAAAAAAGAATACAGAAGGATCGAATCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTTGAAGAACATGTTGCTGATGGAATTCTTACTGCTAAAACTCAATGGCGAGAATATTGCTTGAAGGTCAGAGATTTACCTCAATATCAAGCTGTTGCCTCAAATACATCTGGTTCCACTCCAAAAGATTTGTTTGAGGATGTTGCAGAGGATCTTGAAAAACAGTATCATGAAGACAAGACGCTCATAAAAGATACAATTAAGTCAGGCAAGCCTCCTGTCTCATTCAAGCAGATCACTGTAGTGACTACATCAGTATTTGAGGAGTTTAAGGTTGCTGTCTTGGAAGAAGCTGCTTGTCAAACAATATCTGAGATCAATTTGAAGCTTATATTCGAAGAGTTGTTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCCAAGAAGCGCCAACGCCTTGCTGATGACTTTACTAACCTGTTATATACATTCAAGGATATTACTACTTCCTCAAAATGGGAGGATTGCAAGTCACTTTTTGAGGAAACTCAAGAGTACAGGTCAATTGGCGAAGAAAGCTACTGTAGAGAAATTTTTGAGGAATACATCACATACTTGAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAGGAGGAAAAGGCTAAAAAGGAGAAAGAAAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAGAAAAAAGAAAAGGATAGAGAACGTGAAAAAGATAAGTCTAAGGAACGTCATAGGAAGGATGAAACAGATAGTGATAATAATCAAGACATGGCCGACGGCCATGGTTACAAAGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAAAGGCATCAGAGCAGTATAGATGATGTGGATTCTGAAAAGGAAGAGAAGGAAGATTCTAAAAAATCCCGAAGGCATGGCAGTGACCGCAAGAAGTCTCGGAAGCATGCAAACTCTCCTGAATCCGACACCGAAAACCGGCATAGAAGACACAAGAGGGAGCACTGGGATGGTTCCAGAAAAACTGGGGGGCTTGAGGAACTTGAAGACGGGGAGCTCGGGGATGATGTTGAGAACTAG 3039 0.4245 MANNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNVGMPVIQGQQLQYSQPMQQLTPRPMQPGHPSSSSQAISMQYIQTNRPLTSIPPHSQQTGPPLSNHMPGLGVSVGAPHSSYTFSLSYGQQQDNANALAQYQHPPQMFAPPAGQPWPSSVSQSVVPVTSVQPAGVQSSGATSTDAATNATNQQSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSEGRKYYFNKVTQQSTWSIPEDLKLAREQAQKAANQGMQSETNDTSNTVVSSTPTSTAANAANTSLTSNGLASSPSSVTPIAATDSQQSVSCLSGTSVTHSIVTTSSTGVEPSTVVTTSATPTIVAGSSGLADNSPQQSKMPVYKTLVENQASQDFASANGSSLQDIEEAKRPLPVVGKNNVILPEEKTNDDETFVYANKLEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAVSMFENDERFNAVERPRDREDLFESYMVELERKEKEKAAEEHRRSIAEYRKFLESCDYVKVNSPWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQKRIQKDRIRRGERKNRDAFRKLLEEHVADGILTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVAEDLEKQYHEDKTLIKDTIKSGKPPVSFKQITVVTTSVFEEFKVAVLEEAACQTISEINLKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGEESYCREIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKDREREKDKSKERHRKDETDSDNNQDMADGHGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEDSKKSRRHGSDRKKSRKHANSPESDTENRHRRHKREHWDGSRKTGGLEELEDGELGDDVEN 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0411 1012 Coils Coil 628 648 - -
Aed6g0411 1012 ProSitePatterns WW/rsp5/WWP domain signature. 240 265 IPR001202 GO:0005515
Aed6g0411 1012 MobiDBLite consensus disorder prediction 934 958 - -
Aed6g0411 1012 Coils Coil 493 516 - -
Aed6g0411 1012 SUPERFAMILY WW domain 227 268 IPR036020 GO:0005515
Aed6g0411 1012 Coils Coil 561 581 - -
Aed6g0411 1012 ProSitePatterns WW/rsp5/WWP domain signature. 199 224 IPR001202 GO:0005515
Aed6g0411 1012 MobiDBLite consensus disorder prediction 277 300 - -
Aed6g0411 1012 SUPERFAMILY FF domain 647 722 IPR036517 -
Aed6g0411 1012 Pfam FF domain 447 496 IPR002713 -
Aed6g0411 1012 Pfam FF domain 656 711 IPR002713 -
Aed6g0411 1012 Pfam FF domain 514 564 IPR002713 -
Aed6g0411 1012 Pfam FF domain 585 631 IPR002713 -
Aed6g0411 1012 Gene3D FF domain 445 500 IPR036517 -
Aed6g0411 1012 SUPERFAMILY FF domain 795 856 IPR036517 -
Aed6g0411 1012 ProSiteProfiles WW/rsp5/WWP domain profile. 197 226 IPR001202 GO:0005515
Aed6g0411 1012 CDD WW 197 226 IPR001202 GO:0005515
Aed6g0411 1012 ProSiteProfiles FF domain profile. 512 567 IPR002713 -
Aed6g0411 1012 SUPERFAMILY FF domain 506 574 IPR036517 -
Aed6g0411 1012 ProSiteProfiles FF domain profile. 445 499 IPR002713 -
Aed6g0411 1012 Coils Coil 847 898 - -
Aed6g0411 1012 MobiDBLite consensus disorder prediction 172 207 - -
Aed6g0411 1012 ProSiteProfiles FF domain profile. 652 715 IPR002713 -
Aed6g0411 1012 Coils Coil 776 800 - -
Aed6g0411 1012 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 4 1007 IPR039726 GO:0045292
Aed6g0411 1012 SUPERFAMILY FF domain 436 499 IPR036517 -
Aed6g0411 1012 Pfam WW domain 240 265 IPR001202 GO:0005515
Aed6g0411 1012 Pfam WW domain 197 224 IPR001202 GO:0005515
Aed6g0411 1012 Gene3D FF domain 501 575 IPR036517 -
Aed6g0411 1012 Gene3D FF domain 576 643 IPR036517 -
Aed6g0411 1012 Gene3D FF domain 644 725 IPR036517 -
Aed6g0411 1012 SMART ww_5 235 267 IPR001202 GO:0005515
Aed6g0411 1012 SMART ww_5 194 226 IPR001202 GO:0005515
Aed6g0411 1012 ProSiteProfiles FF domain profile. 580 634 IPR002713 -
Aed6g0411 1012 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 4 1007 - -
Aed6g0411 1012 SUPERFAMILY FF domain 572 641 IPR036517 -
Aed6g0411 1012 MobiDBLite consensus disorder prediction 857 1012 - -
Aed6g0411 1012 MobiDBLite consensus disorder prediction 967 1001 - -
Aed6g0411 1012 MobiDBLite consensus disorder prediction 172 201 - -
Aed6g0411 1012 SMART FF_2 445 499 IPR002713 -
Aed6g0411 1012 SMART FF_2 512 567 IPR002713 -
Aed6g0411 1012 SMART FF_2 654 715 IPR002713 -
Aed6g0411 1012 SMART FF_2 580 634 IPR002713 -
Aed6g0411 1012 SMART FF_2 794 849 IPR002713 -
Aed6g0411 1012 Gene3D FF domain 789 863 IPR036517 -
Aed6g0411 1012 ProSiteProfiles WW/rsp5/WWP domain profile. 234 267 IPR001202 GO:0005515
Aed6g0411 1012 SUPERFAMILY WW domain 198 232 IPR036020 GO:0005515
Aed6g0411 1012 MobiDBLite consensus disorder prediction 857 927 - -
Aed6g0411 1012 CDD WW 240 267 IPR001202 GO:0005515
Aed6g0411 1012 Gene3D - 233 292 - -
Aed6g0411 1012 Gene3D - 178 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0411 Aed-Chr6 3519732 3532529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0411 K12821 - gmx:100806019 1533.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0411 6 3519732 3532529 Aed6g0411 6 3519732 3532529 ECH