LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g0409	ATGGAGAAGATCTGTGTCGCCGTCCGTCTCCGCCCTCCGGTATCCGAAGACTCTTCCTCCTCCTCCGTTGTCGGAGCCTTCTGGAAGGTCGAAGATAACCGCATCTCACTTCACAAGATCCACGGCACTCCACTCTCCGCTTCTTCTTACGCTTTCGGTACATCATCAATTTCTCTGCACTCTTCATTTTTCAAAATTACTCTTCAATTTTGTAACGTTAATTATTTTCTCGATCTTTCAGATCACATATTCGACGAAGGAAGCAGCAATGCTAGTGTCTACGAGCTCCTCGCCAAGGACATCATTCACGCCGCGCTCGACGGCTTCAACGGAACAGCATTTGCGTATGGGCAGACCAGTAGTGGCAAGACTTTCACCATGAATGGTTCTGAAGCTGACGCAGGAGTGATTCCTCGTGCAGTTAGAGACATATTTGCGACAATTGAGACGGTAGGTATGTCTGATCGGGAGTTTCTGATACGAGTTTCCTACATGGAGATCTACAACGAAGAAATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGTTTGGAGCGTGGAGTATTTGTTGCAGGGCTGAAAGAGGAAATTGTAAATAATGCTGAACAAGTTCTGAATCTCATTCAAGCAGGGGAAGTAAACAGACACTTTGGTGAGACAAATATGAACGTAAGGAGTAGCAGATCTCACACAATATTTAGAATGGTGATTGAAAGCAAAGGAAAGGAGTCCAATTCTTCCGATGATTGTTCATTTAATGATGTTGTTCGAGTTTCAGTCTTGTTTTATTTTTATTTTTATGGCAGGGGGCATATCCCGTATCGTGATAGTAAATTGACTCGTATACTCCAACCTGCTCTTGGTGGTAATGCCAAAACGTCCATTATTTGCACCATAGCACCAGAAGAGATTCACATTGAAGAAACAAGGGGAACTCTTCAGTTTGCTAGCAGAGCCAAACGCATCACAAATTGTGTTCAAGTTAACGAGATATTGACGGATGCAGCCTTGTTAAAACGGCAACAATTAGAGATAGAGGAGCTACGTAGTAAGCTTCAGGGATCCCATGCTGAGGTGCTCGAGCAACAGATTCTTAAACTCAGGAATGATTTGCTCAAGTATGAAATGGAGCGTGGGAAGCTTGAAATGGAACTGCAAGAGGAGAGGAAATCACGTGATCAATGGATTAGGGAGCAACGGATGAAAATTGAAAATTCTTGCACTACTAAATCTTTCTCAGACTGTGGGACAAACGGCAGTCAGGGACCGGGACTTTTAAGGCGCGGATTTATGGAAGAGTACAGTGACATTAGTAGTAGTGTATCTCAAGGAGATATGTTCAAATCTCCTAAGGCAGATCCCACTGTTTTTGTAGCCAGGCGATCAAAGTATTCAACATTGCCAGATCACAGCCCCCTTCCAGATGCTTTCTGTAATAATGTGGCTGATGAAGATATGTGGATGAAAATGAACAACGGTTTTGTTGCAGACCTTGATTCCCTTCAAACTACTCCTCCCACCAACCGAAAAGTTCAGCCATTCCCGCCAAGTGATGCAACTGCTGGTTGTACAAGTGAAGTTGAGAAGTATGAACGAGAGGTTCAAGATTTGAGGAGACAACTGGAACTAGCTAAAGAAAGGATAAATGAACTCGAGCAAAAGCATTCAGAAGAAGTGCCTTCAAGCAAGCAACTAATGGTTGAGACACCTAAACATCAACAAGAAACGCAACTAACTCATGAACTACCTCTGAGGTTATCTGAATCTGTGGGAAACTTCAAGGATAGCTTTGAGGAGGTTTTGTCAGTAATGCAGAGATTTTCATCGGGTGGCACATTATCAACTGCAAAGATACTTTCAACCATGAGTGAAATTGGAGATCATCTATTTACAACTTTGGAAGGTCATTTTACCGTGAATACGGGTGGTGAAAGGTCTTCCACTGGGAACAGTACTCTAATCAATGAACAACAAAAAGTGTTTCGGGAGAGGATTGATAATATAGTTACATCACTGGAGTTATCGGAAAGCTCAATAACAGAAGAGCAGGAGAGGAAACATAAGTGCACCTGTGAACACAAGGGCTCTGATTTGGGAGGTGAAACTGCTTACTCAAAGGTGGATTTAAATGAAAGATATGAAAACCTGGAAAAGGAGTTACTACTTTTGAAGGTGGAAAGAGACACATTGCTGCAGAAGTTCTCTGAATCATCAGATAAACTATCAATGTTTTCCAGCCAAAAGGAAAATGCTTTGAAAGATTTAAATACTGAAGTGCTGAGAAGGAAAAATCTAGAAGGGGAAGTTAAGCAGATTGCTGAAGTTTTTGCTAATCGTCAGAAATCACTCATTTCCTTCCATAGTGATGTTAAGACCAAAATTGAGAAATGGAGAGCCCAGACTCCAATCTTGGTGCCCAATTCTTTTGGGTCTCAGTAG	2454	0.4205	MEKICVAVRLRPPVSEDSSSSSVVGAFWKVEDNRISLHKIHGTPLSASSYAFGTSSISLHSSFFKITLQFCNVNYFLDLSDHIFDEGSSNASVYELLAKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSEADAGVIPRAVRDIFATIETVGMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLKEEIVNNAEQVLNLIQAGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKESNSSDDCSFNDVVRVSVLFYFYFYGRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEETRGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRSKLQGSHAEVLEQQILKLRNDLLKYEMERGKLEMELQEERKSRDQWIREQRMKIENSCTTKSFSDCGTNGSQGPGLLRRGFMEEYSDISSSVSQGDMFKSPKADPTVFVARRSKYSTLPDHSPLPDAFCNNVADEDMWMKMNNGFVADLDSLQTTPPTNRKVQPFPPSDATAGCTSEVEKYEREVQDLRRQLELAKERINELEQKHSEEVPSSKQLMVETPKHQQETQLTHELPLRLSESVGNFKDSFEEVLSVMQRFSSGGTLSTAKILSTMSEIGDHLFTTLEGHFTVNTGGERSSTGNSTLINEQQKVFRERIDNIVTSLELSESSITEEQERKHKCTCEHKGSDLGGETAYSKVDLNERYENLEKELLLLKVERDTLLQKFSESSDKLSMFSSQKENALKDLNTEVLRRKNLEGEVKQIAEVFANRQKSLISFHSDVKTKIEKWRAQTPILVPNSFGSQ	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g0409	817	Coils	Coil	525	563	-	-
	Aed6g0409	817	Coils	Coil	711	738	-	-
	Aed6g0409	817	Pfam	Kinesin motor domain	81	252	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	Pfam	Kinesin motor domain	274	327	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	Coils	Coil	343	403	-	-
	Aed6g0409	817	PRINTS	Kinesin heavy chain signature	277	298	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	PRINTS	Kinesin heavy chain signature	108	129	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	PRINTS	Kinesin heavy chain signature	225	242	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	SMART	kinesin_4	1	335	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	Gene3D	Kinesin motor domain	271	358	IPR036961	-
	Aed6g0409	817	MobiDBLite	consensus disorder prediction	511	531	-	-
	Aed6g0409	817	Gene3D	Kinesin motor domain	1	267	IPR036961	-
	Aed6g0409	817	PANTHER	CENTROMERE PROTEIN E	275	793	-	-
	Aed6g0409	817	PANTHER	CENTROMERE PROTEIN E	2	266	-	-
	Aed6g0409	817	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	359	IPR027417	-
	Aed6g0409	817	PANTHER	CENTROMERE PROTEIN E	275	793	-	-
	Aed6g0409	817	ProSiteProfiles	Kinesin motor domain profile.	3	327	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Aed6g0409	817	PANTHER	CENTROMERE PROTEIN E	2	266	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g0409	Aed-Chr6	3509767	3516244	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed6g0409	81	389	Miscellaneous Gene Families	AT2G21380	40.407	4.34e-65	234

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g0409	K11498		-	gmx:100804944	1310.05

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed6g0409	6	3509767	3516244	Aed6g0409	6	3509767	3516244	ECH