Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0408 ATGTTCTTCCACGAAGGCGAAGCGGTTCATTCCTCATATTTCCCGGTTCTCGAAACCATGTTCACGCCAAGTGAAATAGAGGAGCTATTTTCCCTCGTGAACGAACCGGCCAGCCCGGAGTCGGGCTCTGGTTCGCAGGACTCGACCCGGGCGGTCCGGTCCACGAGCGAGAGAAAGCTTAGGCGAATGCAGTCGAACCGGGAGTCGGCCAGGCGGTCCCGTTGGAGAAAGAAGCGTCATGTGGAGAACCTCACGAACCAACTGGACCGGTTGAGAATTGAAAACCGAGAATTAAAAAACCGGTTATTCTTAACCATGCACCAGAATCTTCTACTTTCCATGGAGAATGAAAGTCTTGGATCCGAATCCGTGACCCTTATGGCTAGACTCTCGAATCTTTATCAAATTTTAGGCACCATGATGATTTCACAATAG 435 0.5034 MFFHEGEAVHSSYFPVLETMFTPSEIEELFSLVNEPASPESGSGSQDSTRAVRSTSERKLRRMQSNRESARRSRWRKKRHVENLTNQLDRLRIENRELKNRLFLTMHQNLLLSMENESLGSESVTLMARLSNLYQILGTMMISQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0408 144 PANTHER BZIP TRANSCRIPTION FACTOR 25 141 - -
Aed6g0408 144 CDD bZIP_plant_GBF1 59 108 IPR045314 GO:0003700|GO:0006355
Aed6g0408 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 61 76 IPR004827 GO:0003700|GO:0006355
Aed6g0408 144 SMART brlzneu 54 118 IPR004827 GO:0003700|GO:0006355
Aed6g0408 144 Gene3D - 56 107 - -
Aed6g0408 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 56 102 IPR004827 GO:0003700|GO:0006355
Aed6g0408 144 MobiDBLite consensus disorder prediction 36 51 - -
Aed6g0408 144 Coils Coil 74 101 - -
Aed6g0408 144 MobiDBLite consensus disorder prediction 35 77 - -
Aed6g0408 144 SUPERFAMILY Leucine zipper domain 58 110 IPR046347 GO:0003700|GO:0006355
Aed6g0408 144 Pfam bZIP transcription factor 58 102 IPR004827 GO:0003700|GO:0006355
Aed6g0408 144 MobiDBLite consensus disorder prediction 52 70 - -
Aed6g0408 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 25 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0408 Aed-Chr6 3503081 3503515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0408 11 137 bZIP Transcription Factor Family AT3G49760 38.519 7.90e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed6g0408 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0408 - - gmx:102668006 227.254