Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0398 ATGGTATACAAAACAAGCCCACCAAATCCGCGCCTAAACCTCAGAACAAACCTAACTGAAATTCAATTCAATTCAAGTGAGGCGCAGCGCACCGTTTCCGAGTCTATGAACTTCCAAAAGCTCAGTTCCGTCGATTGGAGCCCTTCGCCGGTGGTGGCTTTAGCCACCAGCTTCGACGGCTCGCGAGTCGCCGCGGCTCGCGAAGATGGCTCCCTCGAAATCTGGCTCGTCTCTCCCGGCTCCATCGGCTGGCACTGCCAACTGACTATACACGGCGACGCTAACAGAAGAGTAACGTCGCTTATTTGGTGCCATGGTGGCTCTGACGGAACTCGCTTGTTCTCGTCTCACGCAGACGGCTCCGTCACTAAGTGGGATCTTTTTAGCTTGCAGCAGAAGACAGTGCTCGATCCGGTTGGTGCAACAATCTGGCAAATGGCTGTGACATTTTCCAAGCTTGACAAGATAAATGATAAAAGGGAGGATGAACGAATTGGGAATGGGCTCCGAGAATTTGATGAACAAGAGAACAGTGAAAGTGATGAAGATTCTTATTCACCTGGTCCTCTTGGGGATTCTGTTAGCAAGCTTCCGCGTGTGGCGATGGGTTTTGACAATGGATATGTGAGGATTTATGATATCGCTGACACAGATGAATTTATTTGTGTAAAATCCTTGCCCTGTGTCAAAGGACGAGTTTTAAGTGTGTCTTGGAGTACAGATGCTAACTACATATATTCAGGAAGTAGTGACGGATTGATACGATGCTGGAACGCTGGATTGGGCAATGAAATCTATAGGATTACAGCTGGACTAGGAGGGTTGGGCAACGGGCATGAACTTTGCATATGGTCATTACTGTCTTTAAGGTCTGGTACACTTGTTAGTGGGGACAGCAGTGGTAGCGTCCAGTTTTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCTTTACACAAGGGACATGTACATGCTCTGGCAGCTGCTCCTAGTCATGATAGGGTGTTCTCTGCTGGTTCTGATGGACAGGTTATTCTTTACAAGCTGTCTAGTAGTCAGTCAGCATCATCTGATGATATCAATTCTCCATCAACCAAGAGATGGATCTATGCTCACTATGTAAGGGCTCATACACATGACGTCAGGGCTCTGACTGTTGCTGCACCGATAAGTCAAGAAGCAAATATTAAGCCAGAAAAGCGGATTAAAAGAGCTCGACGTGAAGAAAAGCCCATTGATTTCAGTTACCCTAAGTGGGCTCATTTGGAGGTCCCCATGCTTATCTCAGCAGGAGATGACACAAAACTTTTTGCACACTCAGTGAAAGAATTCACTAAGTTTTCTCCTCATGATATCTGCCCTTTGCCTCAGAGACCACCCATTCAACTAGTGCTTAATTCTGTCTTTAATCAATCCAAACTGCTTTTGGTCCAATCTTCACAAAAAATAGAGGTTCATTTGCTACAACTCAAAAATGTCTGCACCTCTAGAGGCTCTCCAAAGATCGAATTAGTGGCTCAAGTCAAGAGTAAGGCATCTCAGAGGATAATTTGCAGCACTATTTCTAATTCAGGTGCACTATTCGCGTACTCTAATCATAAAAAGCCTAAGCTTTTTGAATTGAAAGGGTGTGAAGTTGGAACAAGAACATGGGTTATTAATGAAAGGGATCTTCCTCATGGATTACCATTTGCCCATTCTATGATTTTTTCTCACGACTCTTCCAAGTTGATAGTAGCAGGTTGGGACAGAAGGATATATGTTGTGGATGTTACGGGATCAAAATTAGTGCATACTTTTACACCCTGTTGCAAATTGCAAGATGAGGAATTACCTCCAACTGAGCCACCCATAACAAGATTGTTTACTAGTTCTGATGGGCAGTGGTTGGCAGCTGTGAACTGTTTCGGGGATATATATAATGACAATGTACTGATAGTTACAACTTCCTCAAATCAAGTGTATACACTTGATGTAGAGGCCAAGCAGTTGGGAGAATGGTCAAAACTGCACACATGTGGTCTTCCTAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCATCGCCAACTTCATCTTCTGTTGTTATTTACAGTTCCAGGGCAATGTGCCTGATTGACTTTGGGTTGCCCGTGGAGCAAGAAGAAAGTGATATGCTAAATACTCAATATTCAATGACAAGGAGTTTACAAAAAAATAATGTTAAGAAGAGGAGCAGAGATAATAATAGGAAGAACTTTGAAGTTTTACCTTTAAAGAATCCTGTCTTATTTTTATCTCATACAAAAGATTCCTTATTTATGGTAGACAAACCCTGGCTGCAAGTGGTCAAGAGTTTAGAAGCCGCACCAGTCCACAGGCATATATTTGGGACATGA 2397 0.438 MVYKTSPPNPRLNLRTNLTEIQFNSSEAQRTVSESMNFQKLSSVDWSPSPVVALATSFDGSRVAAAREDGSLEIWLVSPGSIGWHCQLTIHGDANRRVTSLIWCHGGSDGTRLFSSHADGSVTKWDLFSLQQKTVLDPVGATIWQMAVTFSKLDKINDKREDERIGNGLREFDEQENSESDEDSYSPGPLGDSVSKLPRVAMGFDNGYVRIYDIADTDEFICVKSLPCVKGRVLSVSWSTDANYIYSGSSDGLIRCWNAGLGNEIYRITAGLGGLGNGHELCIWSLLSLRSGTLVSGDSSGSVQFWDSQHGTLLQAHSLHKGHVHALAAAPSHDRVFSAGSDGQVILYKLSSSQSASSDDINSPSTKRWIYAHYVRAHTHDVRALTVAAPISQEANIKPEKRIKRARREEKPIDFSYPKWAHLEVPMLISAGDDTKLFAHSVKEFTKFSPHDICPLPQRPPIQLVLNSVFNQSKLLLVQSSQKIEVHLLQLKNVCTSRGSPKIELVAQVKSKASQRIICSTISNSGALFAYSNHKKPKLFELKGCEVGTRTWVINERDLPHGLPFAHSMIFSHDSSKLIVAGWDRRIYVVDVTGSKLVHTFTPCCKLQDEELPPTEPPITRLFTSSDGQWLAAVNCFGDIYNDNVLIVTTSSNQVYTLDVEAKQLGEWSKLHTCGLPRRYQEFPGEVIGLSFPPSPTSSSVVIYSSRAMCLIDFGLPVEQEESDMLNTQYSMTRSLQKNNVKKRSRDNNRKNFEVLPLKNPVLFLSHTKDSLFMVDKPWLQVVKSLEAAPVHRHIFGT 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0398 798 MobiDBLite consensus disorder prediction 164 192 - -
Aed6g0398 798 Gene3D - 17 186 IPR015943 GO:0005515
Aed6g0398 798 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 642 798 IPR044622 GO:0010073|GO:0035266
Aed6g0398 798 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 39 641 IPR044622 GO:0010073|GO:0035266
Aed6g0398 798 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 47 636 IPR011047 -
Aed6g0398 798 Pfam WD domain, G-beta repeat 232 258 IPR001680 GO:0005515
Aed6g0398 798 Gene3D - 194 415 IPR015943 GO:0005515
Aed6g0398 798 SMART WD40_4 556 591 IPR001680 GO:0005515
Aed6g0398 798 SMART WD40_4 83 126 IPR001680 GO:0005515
Aed6g0398 798 SMART WD40_4 37 76 IPR001680 GO:0005515
Aed6g0398 798 SMART WD40_4 219 258 IPR001680 GO:0005515
Aed6g0398 798 SMART WD40_4 269 307 IPR001680 GO:0005515
Aed6g0398 798 SMART WD40_4 310 349 IPR001680 GO:0005515
Aed6g0398 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 317 358 IPR001680 GO:0005515
Aed6g0398 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 233 267 IPR001680 GO:0005515
Aed6g0398 798 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 226 258 - -
Aed6g0398 798 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 424 664 IPR011044 -
Aed6g0398 798 Gene3D - 422 714 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0398 Aed-Chr6 3435357 3441062 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0398 K14548 - gmx:100797494 1140.18