Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1283 ATGGCATGCAGGAAGCAAGCTTTGGTCATAATATTTCTCATATCCCTTATCACTTTGTCCTTCTCACAATCACACCTCGATGACAACAATAATAGTGGCGGCATTGCCGTGTACTGGGGCCAAGACGGCCGCGAAGATGATCTGAAAAGCACATGCAACAGTGGAAACTATGCAATTGTGCTCCTTGCTTTCCTCAACAGGTTCGGTTCTGGCAGAACCCCAACTTGGCAATTCCTTGGCCAGTGCGACTTATTCTATGAAGGCGGGAAAAGGTGCACTGAACTAGAGCCAGAAATAAAACACTGTCAGGCCAAAGGCATAAAAGTGTTCCTTTCCATAGGAGGACACCCAGGCTTATCAGACTACTCTCTCAACTCCACCGAGGACGCAAAAGTGGTCGCTAACTACCTCCACACCAACTTCCTCAGCGGCCAATTTGGTCCACTCGGAAGCGTCTATTTAGACGGCATCGATTTCAACATCCAAGTCACAACTGATCACTGGGAAGACCTCGCAAGGGAACTTGACTTTTTCCGACGAAACACCGAAAGCCGTTACTTCCACCTCTCCGCGGCCCCTCGGTGTCCAATCCCAGTCAGCAATCTTGGCAAAGCCATCGAAACGAAGCTCTTCGACTATATCTTCGTCCTGTTCTACAACAACCCGCGTTGCGAATCGTCGTACCGTGGTGACACCGGGCCGTTGCTGGAGTCGTGGGACGAGTGGGTCGGGTTAGTTGCGTCGAATAACTCGTTGTTCGTGGGGTTGCCGGCGACGCTTTCAATTGGGACTGGTTTCGTTCCGCCGACTTTGGTTAACCGTGCTGTGCTTCCGCATGTGAAGAGAGCCTCCAACTACGGCGGAGTGATGCTGTGGGACAGATACCATGATCGTAGAATCAACTTCAGCGGTAGGATACTGCCCAATGTGCTCAAATCCCGGTTGCTGCCGGTTTCGGACGCATAG 966 0.5135 MACRKQALVIIFLISLITLSFSQSHLDDNNNSGGIAVYWGQDGREDDLKSTCNSGNYAIVLLAFLNRFGSGRTPTWQFLGQCDLFYEGGKRCTELEPEIKHCQAKGIKVFLSIGGHPGLSDYSLNSTEDAKVVANYLHTNFLSGQFGPLGSVYLDGIDFNIQVTTDHWEDLARELDFFRRNTESRYFHLSAAPRCPIPVSNLGKAIETKLFDYIFVLFYNNPRCESSYRGDTGPLLESWDEWVGLVASNNSLFVGLPATLSIGTGFVPPTLVNRAVLPHVKRASNYGGVMLWDRYHDRRINFSGRILPNVLKSRLLPVSDA 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1283 321 SUPERFAMILY (Trans)glycosidases 30 304 IPR017853 -
Aed5g1283 321 PANTHER ENDOCHITINASE 6 306 - -
Aed5g1283 321 CDD GH18_hevamine_XipI_class_III 33 308 IPR045321 -
Aed5g1283 321 Gene3D Glycosidases 33 307 - -
Aed5g1283 321 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 6 306 - -
Aed5g1283 321 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 33 321 IPR001223 GO:0005975
Aed5g1283 321 Pfam Glycosyl hydrolases family 18 35 256 IPR001223 GO:0005975
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed5g1283 Aed-Chr5 12233893 12235762 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1283 1 310 Glycoside Hydrolase AT5G24090 42.994 4.52e-84 254