Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1628 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGAAGAAGGTCGTGATGAAAATGTGTTGATGTTTGAAACAACAACCAAGAATCTAACTGGACTTGCCTCTGCTTACACTAAACAAGGTAGCAAAGGACTTAACCAAGATGCCGCCACTCTTTTTCAGGGTTATGGAACGGAAAAGGCAGCATTTTGTGGTGTTTATGATGGGCATGGAAGGAATGGTGAGATAGTAAGCAAAATAGTAAACAGGCGTTTGTGTTCACTGATACTGAGCCAAAAGAAAGTGCATGCAAAGATTGAGGCAGTGACAATGGTCGAAGACAATTCAGCAGCAGCAGCAACAGCTCCAAACAAGAATTGTCAGGAATGGAAAGAGGCTATTCTTGATGGTTTCAGAGTGATGGACAAGGAAGTGTGGGATGTACTAAGCAACGAGGAGGTTTGCTCAGTTGTGTGGGGGACAGACAGTGAAAAAGAAGCAGCAAGGGCAGTGGTGGAAGCAGCAACTACAGCATGGAAACGCAAGTATCCTTCTTCTAAGGTTGATGACTGCACTGTGGTTTGTCTCTTCCTCCACAACAAACCACACTGA 594 0.4428 MGICISSESSAIHEEGRDENVLMFETTTKNLTGLASAYTKQGSKGLNQDAATLFQGYGTEKAAFCGVYDGHGRNGEIVSKIVNRRLCSLILSQKKVHAKIEAVTMVEDNSAAAATAPNKNCQEWKEAILDGFRVMDKEVWDVLSNEEVCSVVWGTDSEKEAARAVVEAATTAWKRKYPSSKVDDCTVVCLFLHNKPH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1628 197 PANTHER ALPHABET, ISOFORM E-RELATED 1 139 - -
Aed4g1628 197 PANTHER ALPHABET, ISOFORM E-RELATED 138 195 - -
Aed4g1628 197 SUPERFAMILY PP2C-like 37 193 IPR036457 -
Aed4g1628 197 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 139 - -
Aed4g1628 197 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 138 195 - -
Aed4g1628 197 Gene3D - 139 196 IPR036457 -
Aed4g1628 197 Gene3D - 23 138 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1628 Aed-Chr4 20992086 20993333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1628 130 195 PP2C-type Phosphatase Gene Family AT5G26010 43.662 2.56e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1628 - - gmx:100795893 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1628 4 20992086 20993333 Aed4g1628 4 20992086 20993333 ECH
Aed6g0444 6 3893813 3896355 Aed4g1628 4 20992086 20993333 PCT