Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1613 ATGAAGGAAGAAAGCAGGGAGAAAGACAAAGGCAAAGAAGACAATAGGATTTGGGGAGCTCTTCTCTTCGGCTTAATTGGTGCCACCGTCACTACCTTCGCGGTCGGTCAGCTACGGAGGAATGTTGAATGGTTCTATACTCAGCTATTGAGGAAACAGTCACGAAAAGGAGAGAGTGGTGGTTCTTTCCGATCAGCTTTTCAGGAAGATGCATGGAGGAGGCACCATAAGCGAATGCAAGAGGAGTTAGAGGAGGAGATGGAAAGAGTGGAACGAATAAGACGTATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTATAAAAGAAGCTATGAGAGCTGGAGGGAAAGCGGTCCTGGTGCATATCATCAGCATTTCCAAAGGGAAGATTGGTACTGGAAGGCTGATACATCCTTTAGAGACAAGAGAACTAATTATCGAGAAACTCCAAGAGAAAGTGGAAACTATGCATTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAAAAACGCCATATTCAGATGCTGAGATCAAGTCAGCATATAGGACTAAGGCCAAGGAGTATCATCCTGATCAGAACCAGGATAATATAGTGGCTGCTGAGGCAAAGTTCAAGGAAGTTTTGACTTCATACGAGGCCATAAAACAGGAAAGGAACCATCATATGTAG 678 0.4351 MKEESREKDKGKEDNRIWGALLFGLIGATVTTFAVGQLRRNVEWFYTQLLRKQSRKGESGGSFRSAFQEDAWRRHHKRMQEELEEEMERVERIRRMQSVFNRERNKYKRSYESWRESGPGAYHQHFQREDWYWKADTSFRDKRTNYRETPRESGNYALSHHYSVLGLDRFRKTPYSDAEIKSAYRTKAKEYHPDQNQDNIVAAEAKFKEVLTSYEAIKQERNHHM 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1613 225 Gene3D DnaJ domain 135 224 IPR036869 -
Aed4g1613 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 223 - -
Aed4g1613 225 SMART dnaj_3 159 222 IPR001623 -
Aed4g1613 225 SUPERFAMILY Chaperone J-domain 157 220 IPR036869 -
Aed4g1613 225 ProSiteProfiles dnaJ domain profile. 160 222 IPR001623 -
Aed4g1613 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 223 - -
Aed4g1613 225 CDD DnaJ 161 215 IPR001623 -
Aed4g1613 225 Coils Coil 69 96 - -
Aed4g1613 225 Pfam DnaJ domain 161 221 IPR001623 -
Aed4g1613 225 PRINTS DnaJ domain signature 184 199 IPR001623 -
Aed4g1613 225 PRINTS DnaJ domain signature 202 222 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1613 Aed-Chr4 20865300 20871653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1613 - - gmx:100812371 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1613 4 20865300 20871653 Aed4g1613 4 20865300 20871653 ECH
Aed6g0423 6 3694274 3697752 Aed4g1613 4 20865300 20871653 PCT