Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1593 ATGGCTGGGGGTTGTGACTATTCTGGTGACGATAACGATAACAACAACAAAGCTTCACAGTCACAAGTGGTTCAGGTTGAACCTGAACCACACCCAGTGAGAGAGCAATTACCTGATGTTCAGTATTGCATTAACAGTCCTCCTCCTTGGAAACAAGCAGTAGTATTGGGATTCCAGCATTATATTCTGACTCTTGGCATGACCGTTCTGATTCCAACTATGATTGTTCCTGAAATGGGTGGAGGCCATGCTGAGAAGGCCAAGGTGATTCAGAATCTGCTGTTTGTTTCTGGATTTAGCACACTTCTGCAATCTTGGTTCGGAACACGATTGCCAACTGTGGTTGTTGGTTCATACAGTTACCTAATACCCATAATGTCAATTGTCCATGCCAAGAGATACACTTCATATACAGATCCTTATGAGAGATTCACTCACACAATTAGAGGAATACAAGGTGCCTTGATCGTGAGTTCATGTTTCCAAGTTTGTATGGGATTCTTGGGCATTTGGAAGGGTGCTGTCAGGTTCCTTAGCCCACTTTCGGTAGTCCCTTATGTAACTTTCACTGGACTTGGTGTCTATCATCTTGGATTCGCAATGTATCTTAACCATTTTATTGAAACCAAGAAGCTTATATATGACCGATTTGCGGTGTTGTTTTCCATTGCAATTGCATGGTTACTTGCACTGCTTCTGACTTCAAGCACTGCATATAACCACTCACCAGAAAATACTCAGAATAGTTGCCGAACTGATCGTGCTGGTCTTATTAGTTCTTCTTCATGGGTACATCTCCCTTTCATACCCTTCCAATGGGGGGTTCCCACCTTCAACGGTGGCGAAGCTGTTGCTATGATAGCCGCTTCTTTTGTTTCTCTATTTGAGTCTACTGGTACATTTTATGCTGCAGCAAGATATGGAAGTGGAACACCCGTGCCACCGCATGTTATCAGTCGTGGAACTGGCTGGGTGGGAGTAGCCACTTTTTTCAGTGGCATGTTTGGTTCTGTAACTGGATGTACGGCATCAGTGGAGAATGCTGGATTATTGGCATTGACAAGAGCGGGAAGCAGAAGAGTCATCCAAATATCAGCTGCCTTTATGATTTTCTTCTCTGTATTTGCTTCTGCAGGTCTTGGTTTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACCAAATTCGTGTTGGGCCTCTCATTCTTCCTCGGCATCTCAATACCACAATATTTCACAGAATATTATCATGTAAAGCAGCATCACGGATGGTTCCACGATATTGTTAGCGTGATCTTCATGTCGCACACAACGGTGGCTGCGTTGGTGGCGTTCATTTTGGACTTCACACTCTCACGTGAAGATAATGAAGTCCGTAAGGACAGTGGTATGCAGTGGTGGGAGAAGTTCAGTGTATATAATGGCGATGGCCGCAACGATGATTTCTACAAATTACCATGCAGACTCAATGAGTTCTTCCCCGCCCTTTAA 1488 0.4402 MAGGCDYSGDDNDNNNKASQSQVVQVEPEPHPVREQLPDVQYCINSPPPWKQAVVLGFQHYILTLGMTVLIPTMIVPEMGGGHAEKAKVIQNLLFVSGFSTLLQSWFGTRLPTVVVGSYSYLIPIMSIVHAKRYTSYTDPYERFTHTIRGIQGALIVSSCFQVCMGFLGIWKGAVRFLSPLSVVPYVTFTGLGVYHLGFAMYLNHFIETKKLIYDRFAVLFSIAIAWLLALLLTSSTAYNHSPENTQNSCRTDRAGLISSSSWVHLPFIPFQWGVPTFNGGEAVAMIAASFVSLFESTGTFYAAARYGSGTPVPPHVISRGTGWVGVATFFSGMFGSVTGCTASVENAGLLALTRAGSRRVIQISAAFMIFFSVFASAGLGFLQFCNLNSFRTKFVLGLSFFLGISIPQYFTEYYHVKQHHGWFHDIVSVIFMSHTTVAALVAFILDFTLSREDNEVRKDSGMQWWEKFSVYNGDGRNDDFYKLPCRLNEFFPAL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1593 495 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 11 376 - -
Aed4g1593 495 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 376 494 - -
Aed4g1593 495 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 376 494 - -
Aed4g1593 495 Pfam Permease family 52 209 IPR006043 GO:0016020|GO:0022857|GO:0055085
Aed4g1593 495 Pfam Permease family 214 375 IPR006043 GO:0016020|GO:0022857|GO:0055085
Aed4g1593 495 MobiDBLite consensus disorder prediction 9 26 - -
Aed4g1593 495 MobiDBLite consensus disorder prediction 1 29 - -
Aed4g1593 495 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 11 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1593 Aed-Chr4 20695880 20699578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1593 27 494 Organic Solute Cotransporters AT1G65550 56.190 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1593 - - gmx:100800316 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1593 4 20695880 20699578 Aed4g1593 4 20695880 20699578 ECH
Aed4g1593 4 20695880 20699578 Aed6g0395 6 3414029 3417300 PCT