Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03080 AACGAGAAGATTCTCTCTCGCAGTCCCAGCAATTCTTCTGGGATTATACTGTTAAAATGGCCAATAATTCTCAGCCCCCTAGTATGCAGTTTCGGCCAGTCATTCAGGCCCAGCAAGGTCAGCCATTTGCTCCAATGGCTTCCCAACAATTTGGACTTGCAGGACATGCTATTCCTTCTTCAAATGTTGCAATGCCTGTTGGTCAGAGTCAGCAATTACAGTATTCACAACCAATGCAGCAGTTGCCTCCAAGACATATTCAGCCTGGTCAACCTGCACCTTCGTCGCAGGTTATACCTATGCAATATATCCAAACAAATAGGCCCCCGACATCCGTCCCACCACATTCACAGCCAACTGTTCCCCACTTAAGCAGTCATATGCCCAGCTTGGCTGTTTCAGCAGCAACTTCTCATTCTTCATATACTTTTCAACCACCGTATAGTCAGCAGCAGGATAATGTTAATGCAATGGCTCAGTACCAGCCATCAGGCCAAATGCATGCTCCTCCGGCTGGACAACCTTGGGTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTACACCAGTGCAACAGGCTGGAGTGCAATCATCTGGTACTCCGTCAACTGATTCTGCAACAAGTGCCCCTAACCAGCAGTCAGCATCTGATTGGCAAGAGCATACTGCAGCTGATGGCAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAACTGATGTCACCTATTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAATTCACATCTTCAGATGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAATTGGCACTGAAAGCTGCCAACCAGGGAATGCAATTAGAAACAAGTGATACATCCAATACTGCTGTTTCATCTGCTGCACCATCAACAGTGACTAATACTGCTAGCTCAAACACTCCTTTGACATCAAATGGGCTTGCTTCAAGTCCAGCTTCTGTCACACCAATTGCATCATCAACTGGTCCTCAGCAGTTGGTTTCTGGATTATCAAGTACCACTGGGACTGAACTGAGTACTGTGGTAACTGCGTCTACGGCAGTAGCTGGACCTGCAAATCCTCTTGACACCACTACACCGTCTAGTGTTGAAAATCAAGCATCTCAGGATTTTGCTGCATCTACCGGTGGAGCTTCTGTTCAAGATATAGAGGAAACCAAAAAAGGAGTGCCAGTTGCTGGAAAAGCTAATGTGACTCTGCCGGAGGAGAAAGCAAATGATAAAGAAACCTTTGCATATGCAAATAAGATGGAAGCAAAAATTGCATTTAAGGCACTATTGGAGTCTGCTAATGTTCAGTCTGATTGGACATGGGAACAGGCGATGAGAGAAATAATCAATGACAAAAGATACAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATGAAGCAGAAAAAAGCTCGAGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTAACTTCATCCATGAGATGGAGCAAAGCAATCAATATCTACATGGTGGAACTCGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACAGGCGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATGTGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGAATTGGAAAAGGAAGAAGAGGAGCAAAAACGAGTACAGAAGGAGCGAGTTCGTCGTGGTGAAAGGAAAAATCGTGATGCATTCCGCAAGTTGTTGGAAGAACATGTTGCTGCTGGAATTCTTAATGCTAAAACTCAATGGAGAGAATACTGCTTGAAGGTAGTTAGGGATTTTCCTCAATATCAAGCTGTCGCATCGAACACATCTGGTTCCACTCCTAAGGATTTGTTTGAGGATGTAGTAGAAGATCTTGAAAATCAGTACCATGAAGACAAGACACTGATAAAAGATATAATTAAGTCAGGCAAGATCACTGTAGTGTCCACTTCGGTGTTTGAGGAATTCAAGGCTGCTATCTTGGAAGAAGCTAGTTGCGAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGACTTGTTAGAGAGAGCTAAAGAGAAAGAGGAGAAAGAAGCTAAGAAGCGCCAGCGCCTTGCTGATGACTTAACTAACCTGTTATATACATTCAAGGATATTACTACATCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACATACCTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAGAAAGGAGAAAGAGAGAGAAGAGAAAGAGAAACGGAAGGAGAAAGAAAAGGAAAAAAAAGAGAAGGATAGAGAACGCGAGAAAGAAAAGTCTAAAGATCGGCATAAGAAGGACGACACAGATAGTGAAAACCAAGATATTGAAAGCCATGGTTTCAAGGAAGAGAAGAAAAAAGACAAAGATAAGGAAAGGAAACACAGGAAGAGGCGACACAGCAGTGTAGAGGATGTGGATTCCGAGAGGGATGAAAAAGAAGAGTCTAAGAAATCACGAAAGCACGGCAGCGACCGAAAGAAATCTCGAAAGCATGCAAACTCTCCAGAATCAGACAATGAAACCCGGCATAGAAGACACAAGAGGGAGCACCGTGATGGTTCCCGGAAAACCGGGGGCCATGAAGAACTTGAAGACGGGGAACTCGGTGATGATGCAGAGATTTAG 2957 0.4349 REDSLSQSQQFFWDYTVKMANNSQPPSMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINIYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVVRDFPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03080 984 SUPERFAMILY FF domain 504 542 IPR036517 -
Adu06g03080 984 CDD WW 215 244 IPR001202 GO:0005515
Adu06g03080 984 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 21 979 IPR039726 GO:0045292
Adu06g03080 984 Coils Coil 819 870 - -
Adu06g03080 984 Coils Coil 493 516 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 829 984 - -
Adu06g03080 984 Gene3D FF domain 760 834 IPR036517 -
Adu06g03080 984 SMART FF_2 632 694 IPR002713 -
Adu06g03080 984 SMART FF_2 445 499 IPR002713 -
Adu06g03080 984 SMART FF_2 562 612 IPR002713 -
Adu06g03080 984 SMART FF_2 766 821 IPR002713 -
Adu06g03080 984 SMART FF_2 512 561 IPR002713 -
Adu06g03080 984 SUPERFAMILY WW domain 245 286 IPR036020 GO:0005515
Adu06g03080 984 ProSiteProfiles WW/rsp5/WWP domain profile. 211 244 IPR001202 GO:0005515
Adu06g03080 984 MobiDBLite consensus disorder prediction 939 955 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 908 930 - -
Adu06g03080 984 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 21 979 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 162 220 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 829 899 - -
Adu06g03080 984 ProSiteProfiles FF domain profile. 558 612 IPR002713 -
Adu06g03080 984 SUPERFAMILY FF domain 550 619 IPR036517 -
Adu06g03080 984 SUPERFAMILY FF domain 767 828 IPR036517 -
Adu06g03080 984 Gene3D FF domain 445 500 IPR036517 -
Adu06g03080 984 SUPERFAMILY WW domain 216 250 IPR036020 GO:0005515
Adu06g03080 984 Pfam WW domain 215 242 IPR001202 GO:0005515
Adu06g03080 984 Pfam WW domain 258 283 IPR001202 GO:0005515
Adu06g03080 984 SMART ww_5 253 285 IPR001202 GO:0005515
Adu06g03080 984 SMART ww_5 212 244 IPR001202 GO:0005515
Adu06g03080 984 Gene3D - 254 295 - -
Adu06g03080 984 Gene3D - 210 253 - -
Adu06g03080 984 ProSiteProfiles FF domain profile. 630 694 IPR002713 -
Adu06g03080 984 ProSitePatterns WW/rsp5/WWP domain signature. 217 242 IPR001202 GO:0005515
Adu06g03080 984 SUPERFAMILY FF domain 437 499 IPR036517 -
Adu06g03080 984 Coils Coil 539 568 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 174 219 - -
Adu06g03080 984 CDD WW 258 285 IPR001202 GO:0005515
Adu06g03080 984 Coils Coil 606 626 - -
Adu06g03080 984 ProSiteProfiles FF domain profile. 445 499 IPR002713 -
Adu06g03080 984 Coils Coil 748 776 - -
Adu06g03080 984 MobiDBLite consensus disorder prediction 303 361 - -
Adu06g03080 984 Pfam FF domain 634 690 IPR002713 -
Adu06g03080 984 Pfam FF domain 514 541 IPR002713 -
Adu06g03080 984 Pfam FF domain 447 496 IPR002713 -
Adu06g03080 984 Pfam FF domain 561 609 IPR002713 -
Adu06g03080 984 ProSitePatterns WW/rsp5/WWP domain signature. 258 283 IPR001202 GO:0005515
Adu06g03080 984 ProSiteProfiles WW/rsp5/WWP domain profile. 252 285 IPR001202 GO:0005515
Adu06g03080 984 SUPERFAMILY FF domain 625 701 IPR036517 -
Adu06g03080 984 Gene3D FF domain 501 543 IPR036517 -
Adu06g03080 984 Gene3D FF domain 544 621 IPR036517 -
Adu06g03080 984 Gene3D FF domain 622 705 IPR036517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03080 Adu-Chr6 108926056 108935138 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03080 K12821 - gmx:100806019 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03080 06 108926056 108935138 Adu06g03080 06 108926056 108935138 ECH