Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03078 ATGGATCTTGGTGTGGTGGGTTTTGATGGGTTGGTGGGTTCAGAAGCTGGGTTTGTTCCATTTGGATCTGGGTTCCTTAAGCATCAAAGATCTGAAGAGGAGGTGAGTAATAATGATCATAATAATAGAAGAGGGGCAAAACTGTCAAAGGTTAATATTACTAGTGGTGATGATGATGATGATGTCATCACAACAACAACATCAAAAGGAATGTTGTTTTTTCAGAATCATCAGAGGAACAACAACAACAATAGCTCTTGTTGTAATGTGTTGTTGAGATCTAATAATAATAATAATAATGGAAATGACAATGTTGCCATTGCTCTCTTCAAACAAGAAGGAGAAGAGAAGATGCTGAGTTTCTCAACAACACCAACACCAAAGTCAGAGACTTTGATTGTGGAAAAGGCTTCCTCAAATGCTACATTGCACACTTCTTATCACCCTTTCTCTAGTTACAACATAAATAATAATGCAGGTTACAATAACAGTAATTGGGGAATGATGATGATGGGAAATAGTAGTAGTAATAATAATGTGGGAAGAGTGGTAGGAGGTGCATTATTCACTCCCTCACAGTGGATGGAGCTGGAGCACCAAGCACTCATTTACAAACCCAATCCTTTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAGCAGCACCGATCCGGAGCCGGGTCGGTGCAGGAGAACCGATGGGAAGAAATGGCGGTGCTCGAGGGACGCAGTTGTGGACCAGAAGTACTGCGAGCGTCACATGAACCGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCTGCTGCCGTCACCACCACCACCACCACCACAACCACCACTTCTAACTCAAAGCTATTGTTGCCTAACAGCAACAATTCAAGTTCTTCATTCTCCATTGTGGGGAACACTGCTTCCAACAACAACAGCAACACTATTTCATTTGGAAACTGCCATGAACACAAGAATGTTATTCAGCAGCAGCAGCCTGTTGCATCTGATGCTTCTGCTGCCAATAATATCAGCAGGATGTTTATGAAGAAAGAGAACAATAATGCAAATGAGAGTTGTTCACTACTTCCAATGCTACCACCAAAGGAAAACCCATTCATGATTCATAACAACCACCATGAATTTGGAGTTGTGACTTGTGATTCACTCCTTAACCCTTCTTCCAATAATAAGAGCAATGATTCACAAAACAATTCCCTAAGGCATTTCATTGATGAGTCAACACAGTTGTCAATCTCAATCCCAAATCATCAATTCATGCCAACCAATGAGAAAGTGACACTCTCACCTTTAAGGGTATCATCATCAAGGGAGTTGGAATTGGAATTAGTAGACCCTATTCAAATGGGGTTAGGAGTTGGAATTGGTGTCAACAACAACAACAACAACAACATTGTTAGACAACCAAATTGGATTCCAATTTCATGGGAGAGTTCAATGGGTGGTCCACTTGGTGAGGTTCTCAACCTTAATAATAATAATAATAATAATAATAATAATAATAACAATAATAAGGGATCTTTGAACCTTATTAGTAGTGATGGTTGGGATAATAGTCCTTCAATAGGGTCATCACCAACTGGAGTGTTGCAAAAGACAACAGCATTTGGTTCACTCTCTAATAGCAGTGCTGGGAGTAGTCCAAGGGCAGCAGACAACAACAAAGGAGGGGCAATCTTGTAA 1707 0.413 MDLGVVGFDGLVGSEAGFVPFGSGFLKHQRSEEEVSNNDHNNRRGAKLSKVNITSGDDDDDVITTTTSKGMLFFQNHQRNNNNNSSCCNVLLRSNNNNNNGNDNVAIALFKQEGEEKMLSFSTTPTPKSETLIVEKASSNATLHTSYHPFSSYNINNNAGYNNSNWGMMMMGNSSSNNNVGRVVGGALFTPSQWMELEHQALIYKPNPLGWGGFHLGFSSSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAAAVTTTTTTTTTTSNSKLLLPNSNNSSSSFSIVGNTASNNNSNTISFGNCHEHKNVIQQQQPVASDASAANNISRMFMKKENNNANESCSLLPMLPPKENPFMIHNNHHEFGVVTCDSLLNPSSNNKSNDSQNNSLRHFIDESTQLSISIPNHQFMPTNEKVTLSPLRVSSSRELELELVDPIQMGLGVGIGVNNNNNNNIVRQPNWIPISWESSMGGPLGEVLNLNNNNNNNNNNNNNNKGSLNLISSDGWDNSPSIGSSPTGVLQKTTAFGSLSNSSAGSSPRAADNNKGGAIL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03078 568 PANTHER - 15 205 IPR031137 GO:0005634|GO:0006351|GO:0032502
Adu06g03078 568 PANTHER - 205 561 IPR031137 GO:0005634|GO:0006351|GO:0032502
Adu06g03078 568 MobiDBLite consensus disorder prediction 30 46 - -
Adu06g03078 568 MobiDBLite consensus disorder prediction 271 297 - -
Adu06g03078 568 MobiDBLite consensus disorder prediction 253 297 - -
Adu06g03078 568 MobiDBLite consensus disorder prediction 30 52 - -
Adu06g03078 568 ProSiteProfiles WRC domain profile. 223 267 IPR014977 -
Adu06g03078 568 Pfam WRC 224 266 IPR014977 -
Adu06g03078 568 Pfam QLQ 189 205 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu06g03078 568 MobiDBLite consensus disorder prediction 545 568 - -
Adu06g03078 568 PANTHER GROWTH-REGULATING FACTOR 9 15 205 - -
Adu06g03078 568 PANTHER GROWTH-REGULATING FACTOR 9 205 561 - -
Adu06g03078 568 MobiDBLite consensus disorder prediction 500 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03078 Adu-Chr6 108907350 108912047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03078 1 562 GRF Transcription Factor Family AT2G22840 34.984 1.40e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Adu06g03078 WRC 5.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03078 - - aip:107605578 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03078 06 108907350 108912047 Adu06g03078 06 108907350 108912047 ECH