Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03070 ATGGGGGGCCATGAGAATGCAATGGGGTTTCATCATGGAAATGAGAGCATTCTGACAAATAATGTTAATGTCTCAGAAATGGATATGAGTTCTTCTATGTCATTGGCTAGGTCTTCTTCAGATGTTGTTGTACCTAATAGTAACCCTTTTCTTGCTTCTTCTTCTTCTTGGGATCCAATTGTTTCCTTAAGCCAATCTCAAACTTTTGGAGGGTCATCAATGGTTACTACTCACAATAGTGATTTTGGAAATTCCTCATCTTACCCTTTTGTTCAATATATGTCTGACTCAACCAATCTTGAGGGCATTATGGTCCACAAAATTCCATCTTTTGGTAGTGGAAACTTCTCAGAAATTGTTGGATCCTTTTGTCAAGAAGGGTCTTCTGATATACCTAACATGGGGTTTAGACCAAGTTATAATCATGGCAATGATGCTGGAACCGAAAGAGCTACAATGAATGAACAATCTCAGGTTGAGGACTCAATTACTGAAGATGGTGCACCAGGAACTGCACCTAGTGGAAATCGAAGAAAGCGCATGCTTGATCATGATTCTTCTTTCAGTCCAAACAAGAATGCTGGTGGCGATGAACTGAAAGACTCTCCAAGGACGATATCTGATGGTGCTAAAGAACACGAAAAGAAGGCGAAAGTCGAGCAGAATGTGAGTGCTGATTTGCGAGGCAAGCAACCGGCAAAGCAATCAAAAGAAAATTCTCCAAGTGGAGAAGCTCCTAAAGAAAATTTCATCCATGTGAGAGCAAGAAGGGGTCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTGAGAAGAGAAAAGATTAGTGAGAGAATGAGATTGCTCCAAGAACTTGTTCCAGGGTGCAACAAGATAACTGGCAAAGCAGTAATGCTGGATGAGATTATAAACTATGTGCAGTCACTGCAGCAACAAGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCGGAACTGAATTTTGACGTAGAACGGATCCTGTCGAAGGAAATTCTTCAATCGCGCTTAGGACATGGAATTGTTGGATATGGTGTTGGTATGAACTCCCCTCACCCATTCTCCAATGGAAGTTTTCAAGGAAACATGGCTGGCATGCCTAGTACATCAACACAATTCCCTCCTTTGCCTCAGGGTGTTTTGGATCATGAGTTCCAAAGTCTTTATGGAATGGGGTATGATCCTAATACAGCACTTGACAATTTGGGACCAAATGTGTCATGTTTATCAGGAAGATTGAAAACAGAATTATAG 1275 0.4141 MGGHENAMGFHHGNESILTNNVNVSEMDMSSSMSLARSSSDVVVPNSNPFLASSSSWDPIVSLSQSQTFGGSSMVTTHNSDFGNSSSYPFVQYMSDSTNLEGIMVHKIPSFGSGNFSEIVGSFCQEGSSDIPNMGFRPSYNHGNDAGTERATMNEQSQVEDSITEDGAPGTAPSGNRRKRMLDHDSSFSPNKNAGGDELKDSPRTISDGAKEHEKKAKVEQNVSADLRGKQPAKQSKENSPSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKEILQSRLGHGIVGYGVGMNSPHPFSNGSFQGNMAGMPSTSTQFPPLPQGVLDHEFQSLYGMGYDPNTALDNLGPNVSCLSGRLKTEL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03070 424 MobiDBLite consensus disorder prediction 197 223 - -
Adu06g03070 424 MobiDBLite consensus disorder prediction 145 164 - -
Adu06g03070 424 CDD bHLH_AtBPE_like 249 334 - -
Adu06g03070 424 Pfam Helix-loop-helix DNA-binding domain 262 310 IPR011598 GO:0046983
Adu06g03070 424 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 423 - -
Adu06g03070 424 SMART finulus 265 315 IPR011598 GO:0046983
Adu06g03070 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 327 IPR036638 GO:0046983
Adu06g03070 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 309 IPR011598 GO:0046983
Adu06g03070 424 Coils Coil 417 424 - -
Adu06g03070 424 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 16 423 IPR024097 GO:0006355
Adu06g03070 424 MobiDBLite consensus disorder prediction 135 247 - -
Adu06g03070 424 Gene3D - 256 330 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03070 Adu-Chr6 108803193 108807313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03070 1 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.763 7.34e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g03070 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03070 - - gmx:100794464 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03070 06 108803193 108807313 Adu06g03070 06 108803193 108807313 ECH