Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03058 ATGAAGAGTTTGTGTGCTTGCTTCTACACAAGCAGTGTCTTCAACTCTCACTCCCACTCTCACTGGAACCATAACCATTCTCATTCTCAATCTCAGATCATGGCGGGAAGCATCTCTGGTCCGAGTGGGGGCAATGCTGCTAACATTTTACTAAATCATGACTTCTCCGGAGGGTTGGATTCTTGGCATGTCAATTGCTGCGACGGCTATGTAGTTTCGGCTGAAGAAGTTTCCCAGTTAGGAATATCAATGGAGACAGATGGTAATTGTGCTGTTATCACCAGCCGAAAAGAATGCTGGCAAGGTCTCGAGCAAGACATCACAAGCAGAGTTTCCATTGGCTCCACTTACATAGTTTCAGCTCTTGTTGGAATATCCGGCCTGTCTCAGGGATCTAATGATGTCCAAGCTACCCTGAAACTTGAATATCACAATTCGGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTACTAGGGGAAACTGGAAAAAGCTGGAAGGTACATTTTCATTGTCGACTATGCCAAAACGAGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTTGATATACTTATTCGCTCCGTAGAGATCGGCTGTTCAAATCCTAACAACAATATTGCAAGAACTGGATGTGTTTCTACTGGAGAAGATAACGTCATAATAAACCCGCAATTTGATGATGGCTTGAACAATTGGTCCGGAAGAGGCTGTAAGATTGCATTGCATGATTCCATGGGAAATGATCACCGGAAGAGTGCAGCGCAAGCTCGCCTACGAGATCTTCGAGACCAGTACATCGGCATTGCCAATGTGCAGGCAACAGACAAAGATTGGATTGATATGCAGGGAAAGTTCCTTCTAAATGGATCCCCATCAAAAGTGGTAATTTATTTAGAGGGTCCTCTGCCGGGTACTGACATTCTTGTTAATAGTTTGGTTGTAAAGCGTGCGCCTAAGACACCTCCATCAACACCACCGGACATAAAGGGTGTTGCTTTTGGGGTTAATGTAATTGAGAACAGCAATCTGGCTGATGGCACTAATGGATGGTATCCCCTTGGTAACTGCACATTGAGTGTTAAAACCGGCTCGCCACATATAATGCCGCCGATGGCAAGAGACTCTCTAGGACCACATGAGCTTCTAAGTGGACGCTACATACTTGTAACAAACCGCACACAAACATGGATGGGTCCTGCTCAGACTATCACTGATAAATTGAAACTCTTTGTGACTTATCAAGTATCGGCTTGGGTTCGGCTTGGTTCGGGATCATCCGGGCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTATCCGATCAAAGATGGCATGAAATCGGTGGGTCGTTTAGAATCGAAAAGCAGCCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTTCAGGTGTTGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAAATATCTAAAGTCTCAAACAGACAAGATCCGAAAGCGTGATGTTACCCTGAAATTCTCTGGACTGGACGCAAGTAACTACTCGAAAACCTCAGTGCAAGTCAGACAAATTCAGAATGATTTTCCAGTTGGAACATGCATCAGCAGAATGAACATTGACAATGAGGATTTTGTAGACTTCTTTGTGAAACATTTTAACTGGGCTGTGTTTGGTAATGAGTTGAAATGGTACTGGACCGAGCCGCAACAGGGGAATTTCAACTACAAGGATGCAGATGATCTCTTAAACTTGTGTCAGAAGAACAAGATAGAAACTCGCGGCCATTGTATCTTCTGGGAAGTGGATGGAACCGTCCAGCAATGGATTAAAGCGCTGAACAAAACTGACCTCATGGCGGCCGTCCAGAACAGATTAAACGGCCTGCTTACTCGGTATAAAGGCAAGTTCAATCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAGGACAGGTTAGGTAAGGACATAAGGACCAACATGTTTAAGACTGCGAATCAACTTGATCCGACCGCTACCCTTTTCGTGAATGATTATCACGTGGAAGATGGATGTGACACCAGATCATGTCCGGAAAAATACATTGAACATATTCTTGATTTGCAAGAACAGGGGTCCCCTGTTGGTGGAATTGGAATTCAAGGCCATATAGATAGTCCGGTTGGGCCTATCGTTTGTTCATCCCTTGATAAACTGGGAATTCTTGGCTTACCTATATGGTTCACCGAGCTAGATGTGTCGTCGACTAACGAATATGTTAGAGCAGATGATTTGGAAGTTATGTTGAGGGAAGCCATGGCTCATCCGGCCGTCGAAGGCCTAATGCTGTGGGGATTTTGGGAGTTGTTCATGAGCCGTGACAACTCTCACTTGGTTAATGCAGAAGGTGAAATCAATGAAGCTGGAAAAAGGTTCCTTGCTCTTAAGCAAGAATGGCTTTCTCATAGCCATGGAAATGTTGATCAGCAAGGTCAATACAATTTTAGAGGCTTTCATGGAACATACAAGGTTGATATTGTCATTGATACAAAGAAAGTTTCCAAGACCTTTGTCCTTGACAAGGGTGACTCTCCAATGGTGGTTTCCATAGACTTCTAA 2646 0.438 MKSLCACFYTSSVFNSHSHSHWNHNHSHSQSQIMAGSISGPSGGNAANILLNHDFSGGLDSWHVNCCDGYVVSAEEVSQLGISMETDGNCAVITSRKECWQGLEQDITSRVSIGSTYIVSALVGISGLSQGSNDVQATLKLEYHNSATSYLFIGRTSVTRGNWKKLEGTFSLSTMPKRVVFYLEGPAPGVDILIRSVEIGCSNPNNNIARTGCVSTGEDNVIINPQFDDGLNNWSGRGCKIALHDSMGNDHRKSAAQARLRDLRDQYIGIANVQATDKDWIDMQGKFLLNGSPSKVVIYLEGPLPGTDILVNSLVVKRAPKTPPSTPPDIKGVAFGVNVIENSNLADGTNGWYPLGNCTLSVKTGSPHIMPPMARDSLGPHELLSGRYILVTNRTQTWMGPAQTITDKLKLFVTYQVSAWVRLGSGSSGPQNVNVALGVDNQWVNGGQTEVSDQRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMVAGLQIFPVDRHARFKYLKSQTDKIRKRDVTLKFSGLDASNYSKTSVQVRQIQNDFPVGTCISRMNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLNLCQKNKIETRGHCIFWEVDGTVQQWIKALNKTDLMAAVQNRLNGLLTRYKGKFNHYDVNNEMLHGSFYQDRLGKDIRTNMFKTANQLDPTATLFVNDYHVEDGCDTRSCPEKYIEHILDLQEQGSPVGGIGIQGHIDSPVGPIVCSSLDKLGILGLPIWFTELDVSSTNEYVRADDLEVMLREAMAHPAVEGLMLWGFWELFMSRDNSHLVNAEGEINEAGKRFLALKQEWLSHSHGNVDQQGQYNFRGFHGTYKVDIVIDTKKVSKTFVLDKGDSPMVVSIDF 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03058 881 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 261 880 - -
Adu06g03058 881 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 752 762 IPR031158 -
Adu06g03058 881 Pfam Carbohydrate binding domain 338 481 IPR003305 GO:0016798
Adu06g03058 881 Pfam Carbohydrate binding domain 47 188 IPR003305 GO:0016798
Adu06g03058 881 SUPERFAMILY Galactose-binding domain-like 336 496 IPR008979 -
Adu06g03058 881 SMART glyco_10 575 825 IPR001000 GO:0004553|GO:0005975
Adu06g03058 881 Gene3D - 43 200 - -
Adu06g03058 881 Gene3D - 334 493 - -
Adu06g03058 881 Gene3D - 246 318 - -
Adu06g03058 881 Coils Coil 807 827 - -
Adu06g03058 881 SUPERFAMILY (Trans)glycosidases 529 832 IPR017853 -
Adu06g03058 881 PANTHER GLYCOSYL HYDROLASE 45 199 IPR044846 GO:0004553|GO:0005975
Adu06g03058 881 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 45 199 - -
Adu06g03058 881 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 209 250 - -
Adu06g03058 881 SUPERFAMILY Galactose-binding domain-like 47 203 IPR008979 -
Adu06g03058 881 Pfam Glycosyl hydrolase family 10 538 795 IPR001000 GO:0004553|GO:0005975
Adu06g03058 881 PANTHER GLYCOSYL HYDROLASE 209 250 IPR044846 GO:0004553|GO:0005975
Adu06g03058 881 PANTHER GLYCOSYL HYDROLASE 261 880 IPR044846 GO:0004553|GO:0005975
Adu06g03058 881 SUPERFAMILY Galactose-binding domain-like 218 320 IPR008979 -
Adu06g03058 881 Gene3D Glycosidases 526 835 - -
Adu06g03058 881 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 529 824 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03058 Adu-Chr6 108570595 108575331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03058 43 881 Glycoside Hydrolase AT1G58370 64.844 0.0 1185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03058 - - gmx:100816678 1478.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03058 06 108570595 108575331 Adu06g03058 06 108570595 108575331 ECH
Adu06g03058 06 108570595 108575331 Adu08g00928 08 16890286 16894304 PCT