Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03054 ATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAGAGAGGACCATGGTCTCCTGATGAGGATGCAACACTCAAGAACTATCTTCACACTCATGGCACTGGAGGAAATTGGATTGCATTGCCAAGAAAAGCTGGTTTAAGGAGGTGTGGGAAGAGTTGCCGTCTAAGGTGGCTGAATTATCTAAGGCCAGATATAAAACATGGAGGATTTACCGAACAAGAGGATCAAATCATTTGCACTCTCTATACTCAAATGGGAAGCAGATGGTCTGCAATAGCATCTCAACTTCCTGGCAGAACAGATAATGATGTCAAAAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGCAGCAAAAGTAATTTCCCCTAATAATAATAATAATAAAACATTATTGACTACTCAACAAAACTCAGATTTTCAAGCTACTAAAAATTGTTCATCATCATCATTAGTGCATCTTCCAATTTTAAGCAATGATATTACTAATTTTAGTTCTAACATAAGTCTTGACCTAATTCATCAACAACTCTATAGTCCACAATTTATGAATTTAGAAATTGGTGGTGCAAATTCAAGGAACAACAAGAATAATAATAGTAGTAGTAATATTGAAGGTTCAACTTCTTCTTCATCACTTGCATTATTGGACTACAAGGGTGGATCATCACTTCTAGAAGAAGAAAAACAACATGGTGTTGGTGGTGATAATGATGAATCTAATAAGGAATTCTTGATGGATTTAGGGTTTGATGGTGAATTTTCTCAAAGTATTAGTAGTTATTGTTACTCTGAGTGGGTTGATTTCAACTGTGCTGAAATTAAGCCACATTGA 840 0.3607 MGRAPCCDKANVKRGPWSPDEDATLKNYLHTHGTGGNWIALPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEQEDQIICTLYTQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMAAKVISPNNNNNKTLLTTQQNSDFQATKNCSSSSLVHLPILSNDITNFSSNISLDLIHQQLYSPQFMNLEIGGANSRNNKNNNSSSNIEGSTSSSSLALLDYKGGSSLLEEEKQHGVGGDNDESNKEFLMDLGFDGEFSQSISSYCYSEWVDFNCAEIKPH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03054 279 PANTHER OS09G0431300 PROTEIN 1 213 - -
Adu06g03054 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Adu06g03054 279 Gene3D - 70 148 - -
Adu06g03054 279 PANTHER OS09G0431300 PROTEIN 1 213 - -
Adu06g03054 279 CDD SANT 16 62 IPR001005 -
Adu06g03054 279 CDD SANT 71 111 IPR001005 -
Adu06g03054 279 MobiDBLite consensus disorder prediction 191 210 - -
Adu06g03054 279 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Adu06g03054 279 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Adu06g03054 279 Gene3D - 7 68 - -
Adu06g03054 279 SMART sant 13 64 IPR001005 -
Adu06g03054 279 SMART sant 67 115 IPR001005 -
Adu06g03054 279 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Adu06g03054 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Adu06g03054 279 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Adu06g03054 279 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03054 Adu-Chr6 108556710 108559579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03054 1 118 MYB Transcription Factor Family AT5G65790 80.508 5.88e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu06g03054 Myb_DNA-binding 8.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03054 K09422 - gmx:100789985 296.975