Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03053 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAAGTGAATCTGAAGGTGCTGAAGGTTCCCGAGATCGAACAGAAGGTGTTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCACTGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGATTGACTGAAACTGGAAAAGATTGGCGCTATGTTTACAAGGCATTAGCTGTTATAGAGTATTTGGTAGCACATGGGTCTGAACGTGCAGTTGATGACATTATAGAGCATACATTTCAAATCTCAGCACTTTCTAGCTTTGAATATGTTGAGCCTAGTGGTAAGGATTCGGGACTAAATGTCAGGAAGAAGGCAGAAACCATTGTGGCCCTTTTGAATAATAGAGAAAAGATACAGGAAGTGAGAAATAAAGCTGCTGCAAACCGTGACAAATACGTTGGAGTTTCTTCTAGTGGAATCACGTACAAGTCTGGGTCAACCTCATTTAGTAGTGGCAGCTATCAGAGCAGTGGTAAATATTCGGGCTTTGGTTCAAATGATGGTGATAGGTTTAAGGATAGCTACAGAGACAAGGGAGACTATGAAGAAGACAAATACATTAGAAGATCACGAAACATCAGTGACGATGAAGAGAACTCCTTCAAAAAGGGTACTGCACACTCTGTCAGCAAAAGTCAGGAGAATGCACCTTCCAGAGTATCTAAGTCATCTACTGCTAATGCCCATGATAATTACAGTTCAGTTGCTTCTCAAAGTTCAAGTGCACCTGCAAATAATACCGAGGATGATTTTGACGACTTTGATCCAAGAGGAACTTCTGCTAAGCCTTCGGCTGGAAGCTCTAATCAAGTTGATCTCTTTGGACAAGATTTAATCAGTGACTTCATGGATGCTCCAACATCTGTTTCTACAGAAAAGGCTGCTGCTAATAGTGTTTCAGAGGTTGATCTATTTGCAGATGCTTCATTTGTATCGGCACCACCTAATGTGGACAAGGGAGCTAGTTCTCAACCTCAGGAAGAAGTGGATCTATTTGCATCACAGCCAGCCATTCCTTCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTAAACCAGTTGCGCAGCCAGACAAGAAGTCAGGAAATTCTTCTTCGGCGAATAGTATCACTTTTGATCCCTTTGCTGTTTCTGAACCAGTTGTGCATACAGACACAGGAAATTCGGCTCCTGTGAATAATAGCACTTTTGATCCCTTTGCCATTCCTGAACCAGTTGCGCAGCCTAACAATAAGTCAAGAAATTCTGCTCCTGCAAACAATAGCACTTTTGACCCCTTTGCTGCGATTCCACTTAATAATTTTGATGGATCTGATGTTTTTGGTGATTTTACTTCTCAACCTGATTCAGCATCTTCACAGACCTCCAATAATGTTGCCAGTGACATCAACCATGATAAGATGAATGGTAAAACTTCAGTAGACTCTAAAGTTTCACCTAAAAAGGATCCATTCCAGGTGAAATCTGGCATCTGGGCAGATTCACTTAGCCGTGGACTGATTGATCTCAATATATCTGGCCCCAAGAAAGTAAATCTTGCAGATGTTGGGATTGTGGGTGGATTAAGTGATGGATCAGATGAAGTGGTGAAAGGCCCTCCTCCACCTTCATTTTACATGGGTAGAGCTATGGGTTCCGGTTCTGGTCTTGGTAGATCTGGATTCACTCCTTCACAGACAGAAACCGGAAATGACATGTTCTCAAGCCTTAGCAGCCAACAATATCAATTTGGTGGATTCCAGAAGTAA 1839 0.4203 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIALATKKFTECQMVMNVLWTRLTETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDSGLNVRKKAETIVALLNNREKIQEVRNKAAANRDKYVGVSSSGITYKSGSTSFSSGSYQSSGKYSGFGSNDGDRFKDSYRDKGDYEEDKYIRRSRNISDDEENSFKKGTAHSVSKSQENAPSRVSKSSTANAHDNYSSVASQSSSAPANNTEDDFDDFDPRGTSAKPSAGSSNQVDLFGQDLISDFMDAPTSVSTEKAAANSVSEVDLFADASFVSAPPNVDKGASSQPQEEVDLFASQPAIPSVTPTVDLFSIPKPVAQPDKKSGNSSSANSITFDPFAVSEPVVHTDTGNSAPVNNSTFDPFAIPEPVAQPNNKSRNSAPANNSTFDPFAAIPLNNFDGSDVFGDFTSQPDSASSQTSNNVASDINHDKMNGKTSVDSKVSPKKDPFQVKSGIWADSLSRGLIDLNISGPKKVNLADVGIVGGLSDGSDEVVKGPPPPSFYMGRAMGSGSGLGRSGFTPSQTETGNDMFSSLSSQQYQFGGFQK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03053 612 Pfam ENTH domain 27 147 IPR013809 -
Adu06g03053 612 MobiDBLite consensus disorder prediction 475 511 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 235 277 - -
Adu06g03053 612 PANTHER EPSIN/ENT-RELATED 1 408 - -
Adu06g03053 612 PANTHER EPSIN/ENT-RELATED 421 603 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 581 598 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 475 497 - -
Adu06g03053 612 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Adu06g03053 612 Gene3D - 24 164 IPR008942 -
Adu06g03053 612 MobiDBLite consensus disorder prediction 382 401 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 438 452 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 557 598 - -
Adu06g03053 612 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Adu06g03053 612 SMART enth_2 26 152 IPR013809 -
Adu06g03053 612 MobiDBLite consensus disorder prediction 176 193 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 431 452 - -
Adu06g03053 612 CDD ENTH 28 144 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 176 302 - -
Adu06g03053 612 MobiDBLite consensus disorder prediction 199 234 - -
Adu06g03053 612 PANTHER CLATHRIN INTERACTOR EPSIN 1 421 603 IPR033521 GO:0006623|GO:0030276
Adu06g03053 612 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 408 IPR033521 GO:0006623|GO:0030276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03053 Adu-Chr6 108544513 108551360 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03053 K12471 - gmx:100809198 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03053 06 108544513 108551360 Adu06g03053 06 108544513 108551360 ECH