Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01074 ATGGTGCTTCCTCACTTTCTTCCCTTCTTCTTCCTACTTCTTGTTGTTGATGGCAGGTTCGTGGTGGAGAAGAGCAGCATCACGGTGCTGTCTCCGCACACCATGAAGGCCAAGCACGACGGCGCCATAGGAAACTTCGGTGTTCCTAACTACGGAGGATTCATAGTGGGATCCGTACACTACCCTGACAAAGACTCTCATGGTTGTAAGCCTTTTGAAGGTGATAAGCCTTTCAAGATTCACTCTTATCGCCCCACTATTCTTCTCCTTGATCGTGGAGAGTGTTACTTTGCGTTGAAGGTATGGCATGCTCAAATAGCTGGAGCTGCAGCAGTGTTAGTAACTGACAGCATTGATGAGACCCTAATAACCATGGATTCTCCAGAAGAGAGTAACGATGCAGATGGATACATAGAGAAGATTCAGATCCCCTCGGCGCTGATCGAGAAATCTTTCGGCGACGAGCTGAAGCAAGCACTGAGCAAGAAAGACGAAGTGATGCTTAGAATTGACTGGAGAGAATCAGTGCCTCACCCAGACAACAGAGTGGAGTATGAGCTATGGACTAACAGCAACGACGAGTGTGGCGCTCGCTGCGAAGAGCAGATGAATTTCGTCAAGAATTTCAAAGGACATGCTCAGATTCTTGAGAGGGGAGGCTACACATTGTTCACTCCTCACTACATAACCTGGTTTTGTCCCAAGCCGTTTGTAGAGAGCAGACAGTGCAAATCTCAGTGTATAAATCATGGAAGGTATTGTGCGCCGGATCCCGAGAAGGATTTTGGAGAAGGATATGAAGGGAAGGATGTGGTGTATGAAAACTTGAGGCAGTTGTGCGTTCATAGAGTTGCCAATGAGAGTAACCGTTCTTGGGTTTGGTGGGATTATGTAACAGATTTCCATATCAGGTGTTCTATGAAGGAGAAAAAATACACCAAACAATGTGCTGAAGATGTCATGAAATCATTAGATTTGCCTATAGAGAAAATTAAAAAGTGCATGGGTGACCCCGAAGCTGATGTGGAGAATGAGGTGCTAAAGAATGAGCAACTACGCCAGATAGGGCATGGATCTCGTGGCGATGTCACCATCTTGCCAACTTTGGTTATAAACGATGTCCAGTATCGAGGAAAGTTGGAGAGATCTGCTGTTCTAAAAGCTGTATGTGCTGGATTCGAGGAGACTACTGAACCTCCAGTTTGTTTAAGTGGAGATATTGAGACTAATGAGTGCCTTGAAAGAAATGGAGGATGTTGGAAGGATGAGAGGGCCAACATAAGTGCTTGCAGAGATACTTTTAGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAAAGGTGTCCAGTATAAGGGTGATGGTTATACATCATGTGAAGCTTTTGGACCTGCAAGGTGTTCAATAAACAATGGAGGTTGTTGGTCAGAAACTAAAAACAAATTAACTTTCTCAGCTTGCTCAGAATTTATAGTAAATGGTTGTCGTTGCCCAGTTGGATTCCATGGGGATGGATACAAATGTGAAGATGTTGATGAATGCAAGGACCGAAGCGCTTGTCAGTGTGATGGCTGCACCTGCAAGAATACATGGGGTAGCTATGATTGCAAATGCAAAGGAAATCTTCTTTACATGAGGGAACAAGATGTTTGTATTGAAAGAAGTGGATCAAGATTTGGGCGGTTCCTCGCATTTTTGGTGATAGCAGTTGTTGCAGCCGCCGGTTTAGCCGGTTATGTATTCTACAAATACAGACTCAGGGCTTACATGGACTCGGAAATCATGGCTATCATGTCCCAGCACTGTATAAGACATAATCTAATAATGGCAAAATGA 1830 0.4459 MVLPHFLPFFFLLLVVDGRFVVEKSSITVLSPHTMKAKHDGAIGNFGVPNYGGFIVGSVHYPDKDSHGCKPFEGDKPFKIHSYRPTILLLDRGECYFALKVWHAQIAGAAAVLVTDSIDETLITMDSPEESNDADGYIEKIQIPSALIEKSFGDELKQALSKKDEVMLRIDWRESVPHPDNRVEYELWTNSNDECGARCEEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVESRQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHIRCSMKEKKYTKQCAEDVMKSLDLPIEKIKKCMGDPEADVENEVLKNEQLRQIGHGSRGDVTILPTLVINDVQYRGKLERSAVLKAVCAGFEETTEPPVCLSGDIETNECLERNGGCWKDERANISACRDTFRGRVCECPVVKGVQYKGDGYTSCEAFGPARCSINNGGCWSETKNKLTFSACSEFIVNGCRCPVGFHGDGYKCEDVDECKDRSACQCDGCTCKNTWGSYDCKCKGNLLYMREQDVCIERSGSRFGRFLAFLVIAVVAAAGLAGYVFYKYRLRAYMDSEIMAIMSQHCIRHNLIMAK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01074 609 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 5 594 - -
Adu04g01074 609 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 5 594 - -
Adu04g01074 609 ProSitePatterns Calcium-binding EGF-like domain signature. 508 534 IPR018097 GO:0005509
Adu04g01074 609 Gene3D Laminin 402 458 - -
Adu04g01074 609 Pfam PA domain 57 156 IPR003137 -
Adu04g01074 609 Gene3D Laminin 461 550 - -
Adu04g01074 609 Gene3D - 17 179 - -
Adu04g01074 609 SMART egfca_6 508 550 IPR001881 GO:0005509
Adu04g01074 609 SUPERFAMILY PA domain 85 176 IPR046450 -
Adu04g01074 609 CDD EGF_CA 508 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01074 Adu-Chr4 20097283 20102382 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01074 04 20097283 20102382 Adu04g01074 04 20097283 20102382 ECH