Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00980 197 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Accr4g00980 197 PANTHER OS06G0237300 PROTEIN 4 93 - -
Accr4g00980 197 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Accr4g00980 197 Gene3D Cysteine Rich Protein 4 74 - -
Accr4g00980 197 Gene3D Cysteine Rich Protein 105 174 - -
Accr4g00980 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Accr4g00980 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Accr4g00980 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 102 135 - -
Accr4g00980 197 SMART lim_4 9 61 IPR001781 -
Accr4g00980 197 SMART lim_4 109 161 IPR001781 -
Accr4g00980 197 CDD LIM2_SF3 110 170 - -
Accr4g00980 197 ProSiteProfiles LIM domain profile. 108 168 IPR001781 -
Accr4g00980 197 CDD LIM1_SF3 6 68 - -
Accr4g00980 197 FunFam LIM domain and actin-binding 1 104 174 - -
Accr4g00980 197 FunFam LIM domain and actin-binding 1 4 74 - -
Accr4g00980 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 136 175 - -
Accr4g00980 197 Pfam LIM domain 10 64 IPR001781 -
Accr4g00980 197 Pfam LIM domain 110 164 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00980 Accr-Chr4 9301840 9303170 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Accr4g00980 LIM 1.9e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00980 K09377 - gmx:100499947 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00977 3 10947551 10949218 Accr4g00980 4 9301840 9303170 CCT
Accr4g00980 4 9301840 9303170 Accr4g00980 4 9301840 9303170 ECH