Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2999 ATGCTTGTCCTGCTTATGGTGCTTGACCGATCAATTCCTATTTCTCACGCCACCTGCACTCTGTACGTGCTTCTTCCTGCTGGGGCTTGCAAGGAAGAAAAGGAACTCAAAACCACAGAGAAAGACGAAGCTTTGATAACTGAAAGAAGCAGAGAGGTTAAATACTTGAAAATGAGGAGTGGCTTTCTTCTTCTCTATCTTAGTCTAGCCATCATTTCCCTCATTCATTGTGATGCAGAGAGATCGATGAGATTCTCAAAAGGTCCGAAACATGGGAGAATTCTGAGACACAAGCACGCCAAGAAGTTGAGAATGGCTTTAGAGAATTTTGATTTTTCTCCCTTGGAATTTTCAAACGCGCAGAGAGTTGAGTCATCATCTCCTTTGCCCCCTTATGAATCTCTGGCTCCTAATCCTTTACCTCCGACGGGCCTTCAAGTACCACCTCCAGGCCCATCTGGGTCTCTTCCCACACCTACACCACAAAGCATCCCAAACTCACCTGGCATGGGTTCACCATTACAAAATCCTCCAATTATTTTCCCGGGTCCACCTGGTAACATTCCGACCACACCTGGGTCTACAACAAGCCCACCAACTGGGCCGGACTCACCTGAACCAATACAAAATCCTCCTATCATTCTCCCGGGCCCCCCAGGATCCATCCCATCCCCGAGCAGTGGAGGCACTGGTCCAGGTTCCCCAGAACCAATACAAAATCCTCCAATTATTCTCCCAGGCCCTCCTGGATTTCCATCCCCAAGTGGAGGCACTGGGCCTGGCTCACCTGAACCGATACAAAACCCACCCGGATCTACAATTCCATCTCCAAATGAAGGTTCTGTTCCAAACTCCCCAGAACCAATAGAAAATCCTCCTATTATTCTTCCAGGCCCACCTGGGTCAACCCCAAACCCGTCTCCTAGTGGTGGAGGCAGTGTTCCCAGCCCAACAGTGTTTGAGCCTCCTGTAGTGTTTCCACCACCTTCAGTGCCTCCCCCTCCTGGGCGTATGGCCCCAAGTGGAGCCTTATGGTGTGTGGCTAAGCCTTCAGTCCCAGACCCAATAATGCAAGAAGCCATGAACTATGCTTGTGGGTCAGGAGCAGATTGTGAGCCCATTCAACCCAATGGACGTTGCTTTGAGCCCGATACTGTTATTGCACACACTTCATTTGCCTTCAATAGTTTCTGGCAAAATTCCAAGGCTACTGGTGGGCTCTGCGACTTTGGAGGCACTGGCTTGCTTGTTTCAGGGGACCCAAGCTACAATGGATGCCACTTTGTCTACAGTTAA 1296 0.4969 MLVLLMVLDRSIPISHATCTLYVLLPAGACKEEKELKTTEKDEALITERSREVKYLKMRSGFLLLYLSLAIISLIHCDAERSMRFSKGPKHGRILRHKHAKKLRMALENFDFSPLEFSNAQRVESSSPLPPYESLAPNPLPPTGLQVPPPGPSGSLPTPTPQSIPNSPGMGSPLQNPPIIFPGPPGNIPTTPGSTTSPPTGPDSPEPIQNPPIILPGPPGSIPSPSSGGTGPGSPEPIQNPPIILPGPPGFPSPSGGTGPGSPEPIQNPPGSTIPSPNEGSVPNSPEPIENPPIILPGPPGSTPNPSPSGGGSVPSPTVFEPPVVFPPPSVPPPPGRMAPSGALWCVAKPSVPDPIMQEAMNYACGSGADCEPIQPNGRCFEPDTVIAHTSFAFNSFWQNSKATGGLCDFGGTGLLVSGDPSYNGCHFVYS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2999 431 MobiDBLite consensus disorder prediction 286 306 - -
Acco01g2999 431 Gene3D - 339 429 - -
Acco01g2999 431 PRINTS Proline rich extensin signature 141 162 - -
Acco01g2999 431 PRINTS Proline rich extensin signature 171 187 - -
Acco01g2999 431 PRINTS Proline rich extensin signature 207 232 - -
Acco01g2999 431 PRINTS Proline rich extensin signature 128 140 - -
Acco01g2999 431 PRINTS Proline rich extensin signature 188 205 - -
Acco01g2999 431 Pfam X8 domain 344 414 IPR012946 -
Acco01g2999 431 MobiDBLite consensus disorder prediction 123 335 - -
Acco01g2999 431 MobiDBLite consensus disorder prediction 235 272 - -
Acco01g2999 431 PANTHER BETA-1,3 GLUCANASE 340 428 IPR044788 -
Acco01g2999 431 FunFam Glucan endo-1,3-beta-glucosidase 4 339 431 - -
Acco01g2999 431 SMART X8_cls 344 428 IPR012946 -
Acco01g2999 431 MobiDBLite consensus disorder prediction 320 335 - -
Acco01g2999 431 MobiDBLite consensus disorder prediction 132 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2999 Acco-ChrAcco01 47612505 47615021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2999 332 428 Glycoside Hydrolase AT2G05790 47.000 1.75e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2999 01 47612505 47615021 Acco01g2999 01 47612505 47615021 ECH