Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03787 ATGCATCCCGCCCAGTCCACCGCCTTCATCGTCCCCACCGCCTGGTCCGGCCGCGTGTGGGGCCGCACCCTGTGCTCCACGGACTCCGCCGGAAAATTCTCCTGCCTCACCGGAGACTGCGGTTCCTCCGCCGTGGAATGCAATGGCGGAGGCGCCACCCCGCCAGCCACACTGGCGGAGTTCACCTTGAACGGGGGCGGCGGACTGGATTTCTACGACGTCAGCATGGTGGACGGGTACAACCTCCCCATGCTGGTGGAGGCGCAAGGCGGCGGTGGGAACTGCACCGCAACGGGATGCGCGGTGGACTTGAACGGAGGGTGTCCGGCGGAGCTGAAGGTGAAGGCGGCTAGTGGGGAGGGCGTGGCGTGCAAGAGCGCGTGTGAAGCCTTCGGGGATCCGCGGTATTGTTGTAGTGGGCCCTACGCGACGCCTGAGACATGCAAGGCAAGTTGGTACTCGCAATTGTTCAAAAGCGCGTGCCCACGCGCCTATAGCTTCGCATACGATGATGCCACGAGCACCTTCACCTGTGCCTCCGCGAATTACCGCATCACTTTCTGTCCCTCTTCCACCAAAAGCTCCATCATGAAATCAGGAAATGGGAAATTCCCAGCTGCAGTAGATATCTCAGTTGGCCACGCTTATGGTGTGAAGTCACGCAAGGTCATGCCATTAGCCATTGCCACTGTTTCTTTAACAATATCTCAGCTGAGCCTCCTTCTCTCTCCATCTTCAAAGTTCAGTTGA 750 0.5947 MHPAQSTAFIVPTAWSGRVWGRTLCSTDSAGKFSCLTGDCGSSAVECNGGGATPPATLAEFTLNGGGGLDFYDVSMVDGYNLPMLVEAQGGGGNCTATGCAVDLNGGCPAELKVKAASGEGVACKSACEAFGDPRYCCSGPYATPETCKASWYSQLFKSACPRAYSFAYDDATSTFTCASANYRITFCPSSTKSSIMKSGNGKFPAAVDISVGHAYGVKSRKVMPLAIATVSLTISQLSLLLSPSSKFS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03787 249 FunFam THAUMATIN-LIKE PROTEIN 1 1 189 - -
Spst3g03787 249 ProSiteProfiles Thaumatin family profile. 1 189 IPR001938 -
Spst3g03787 249 CDD TLP-PA 1 188 - -
Spst3g03787 249 PANTHER OS03G0233200 PROTEIN 3 189 IPR001938 -
Spst3g03787 249 Pfam Thaumatin family 2 189 IPR001938 -
Spst3g03787 249 PRINTS Pathogenesis-related protein signature 18 29 IPR001938 -
Spst3g03787 249 PRINTS Pathogenesis-related protein signature 70 86 IPR001938 -
Spst3g03787 249 PRINTS Pathogenesis-related protein signature 179 188 IPR001938 -
Spst3g03787 249 PIRSF PR5 1 230 IPR001938 -
Spst3g03787 249 Gene3D Thaumatin 1 189 IPR037176 -
Spst3g03787 249 SMART tha2 1 189 IPR001938 -
Spst3g03787 249 SUPERFAMILY Osmotin, thaumatin-like protein 2 190 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03787 Spst-Chr3 87901625 87902528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03787 1 194 Receptor kinase-like Gene Family AT5G38280 51.759 6.00e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03787 - - gmx:100809419 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00277 9 2633758 2636208 Spst3g03787 3 87901625 87902528 ECH
Spst2g02652 2 26124981 26126879 Spst3g03787 3 87901625 87902528 ECH
Spst3g03787 3 87901625 87902528 Spst3g03787 3 87901625 87902528 ECH
Spst2g02651 2 26115604 26117660 Spst3g03787 3 87901625 87902528 ECH
Spst3g03787 3 87901625 87902528 Spst3g03786 3 87886994 87888269 ECH
Spst3g03787 3 87901625 87902528 Spst3g03787 3 87901625 87902528 PCT