Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02652 ATGGCTCGCCGTCTTCTCTTTCTCATTATTCTCAGCCTTGTCGCATTATTCTTCTTCTCAGAGGTACAATCAGCATCGTTCAAAATTGTGAACAAGTGCCGCCACACGATATGGCCGGGATTACTCTCAGGCGCCACCTCGCCGCCGCTTCCCACCACCGGATTCGCTCTCCAGGGCGGAGAATCGAAGACATTAAAAATCCCGAAATCTTGGTCGGGTCGGATATGGGCACGGACCCTCTGCGGTCAAGACTCCGACGGAAAGTTCTCTTGTGCCACCGCCGACTGTGGTTCAGGCAAAGTAGAGTGCGTCGGCGGTGCCAAGCCGCCGGCGACATTGGCGGAGTTCACCTTGAACGGCGCCGATGGGTTGGACTTCTACGACGTGAGTTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCGAAGGACGGCACGAGGGGCGGGTGCAGCGCCACGGGGTGTCTCGTCGACCTCAACGGCGGGTGTCCAGCGGAGCTGAGGGTGGCGCTTGTTAACGGCAGCCGCAGGAGCGTGGCGTGCCGGAGCGCGTGCGAAGCCTTTGGTGACCCTCGTTTTTGCTGCAGCGAGGGGTACTCGACGCCTGACACGTGTGGTCCTTCTCTTTATTCGCTATTCTTCAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAGACCAGCACTTACACATGTGCCTCCGCCAACTATTTGATCATTTTCTGCCCCTTGCCCTATACCAGCCAAAAACTGTTGGGAGCACGGAAAGATGGGGCACAGCTTCCCCTGGTAAACAAAACTATGATGTACTTATCAAGGCTACAGTCAAGTGGTTCTTCACCATCAGGTGTGGTTCAAACGAAGAGTATAGCTTATGTTGCTTCTATTTTAGTGGCTTTGTTGCTGCCCTCTATAGCATCATTTATGGATTATGTTTCCTTGGACATTTCAGATAGATAG 972 0.5412 MARRLLFLIILSLVALFFFSEVQSASFKIVNKCRHTIWPGLLSGATSPPLPTTGFALQGGESKTLKIPKSWSGRIWARTLCGQDSDGKFSCATADCGSGKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCPAELRVALVNGSRRSVACRSACEAFGDPRFCCSEGYSTPDTCGPSLYSLFFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKLLGARKDGAQLPLVNKTMMYLSRLQSSGSSPSGVVQTKSIAYVASILVALLLPSIASFMDYVSLDISDR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02652 323 SMART tha2 27 247 IPR001938 -
Spst2g02652 323 CDD TLP-PA 26 246 - -
Spst2g02652 323 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Spst2g02652 323 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Spst2g02652 323 Gene3D Thaumatin 25 247 IPR037176 -
Spst2g02652 323 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Spst2g02652 323 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Spst2g02652 323 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Spst2g02652 323 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Spst2g02652 323 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Spst2g02652 323 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Spst2g02652 323 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Spst2g02652 323 PANTHER OS03G0233200 PROTEIN 12 247 IPR001938 -
Spst2g02652 323 Pfam Thaumatin family 31 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02652 Spst-Chr2 26124981 26126879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02652 5 247 Receptor kinase-like Gene Family AT5G38280 52.439 4.64e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02652 - - gmx:100802252 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02652 2 26124981 26126879 Spst2g02652 2 26124981 26126879 ECH
Spst2g02652 2 26124981 26126879 Spst3g03787 3 87901625 87902528 ECH
Spst2g02652 2 26124981 26126879 Spst3g03786 3 87886994 87888269 ECH