Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02651 ATGATGAATACTCAAGGCCAACTTATGGATCTCATACTATCCTCATATACCACTCTCATTGCTCTCCTACTCTTCGCTCCCCTGGGGGTTATGGGTGCCACTTTCACATTCGTTAACCGATGCGATTACACAGTCTGGCCAGGCATTCTTGCAAATGCCGGTAGCCCACCTCTCCAAAGCACCGGCTTTGAGCTGCCCAAGGACACTTCTCGCGCTTTCCAAGCCCCCACCGGCTGGTCCGGCCGTTTCTGGGCCAGAACCGGTTGCACATTCGACGGATCCGGCTCCGGCTCCGGCTCATGCCTCACAGGCGACTGCGGTTCCGGTCAAGTTGAATGCAACGGCGCCGGAGCTGCCCCACCGGCCACCCTCGCCGAGTTTACGCTTGGCACCGGAGGCCAAGACTTCTACGATGTCAGCCTCGTCGACGGCTACAACCTTCCCATGATCGTGGAGGGCACTGGCGGGTCGGGTCTCTGTGCCTCCACGGGCTGCACATCGGATCTGAACCAACAATGCCCGGCGGAGCTGAGAGCCTCGGAGGGAAGCGCGTGCAAGAGTGCGTGCGAGGCTTTTGGTAGCCCCGAATACTGCTGCAGTGGCGCGTATGGCTCACCCGCTACCTGTAGGCCCTCCATTTACTCGGAGATGTTCAAGGCTGCTTGCCCCAGATCGTATAGCTACGCCTACGATGACGCCACCAGTACGTTTACGTGTACCGGCGCCGATTATACTGTTACCTTCTGTCCATCCTCTCCGAGTCAGAAATCTTCACGAGATACCACCAACCCCATGCCCTCAACATCATCATCATCATCACAAACGTCAGGGACAGTGACAGGAACAGAAGCAGGAACAGAAATAGGATCCGAAGGAGGAGCATTGGTATACTCGGGTGCAGACAACGGCGTTGTGTATAACTCCGTTACGGATTCCGGGTCAAGTTCAGGATCCGGAGGAGAAACAATGCTTGCAGATGGGTCATATTTAGCTGGATTGGCCGTGGGCGACTCTTCTCCCAGAAGAACAGTTTCCATGGCGTTTGTGTACTCGGCTAGCTTTTTGCTTATTTTCACCTTGCTTTAG 1086 0.5562 MMNTQGQLMDLILSSYTTLIALLLFAPLGVMGATFTFVNRCDYTVWPGILANAGSPPLQSTGFELPKDTSRAFQAPTGWSGRFWARTGCTFDGSGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSRDTTNPMPSTSSSSSQTSGTVTGTEAGTEIGSEGGALVYSGADNGVVYNSVTDSGSSSGSGGETMLADGSYLAGLAVGDSSPRRTVSMAFVYSASFLLIFTLL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02651 361 ProSitePatterns Thaumatin family signature. 97 113 IPR017949 -
Spst2g02651 361 ProSiteProfiles Thaumatin family profile. 32 250 IPR001938 -
Spst2g02651 361 PANTHER OS03G0233200 PROTEIN 23 250 IPR001938 -
Spst2g02651 361 CDD TLP-PA 34 249 - -
Spst2g02651 361 FunFam THAUMATIN-LIKE PROTEIN 1 33 250 - -
Spst2g02651 361 MobiDBLite consensus disorder prediction 250 285 - -
Spst2g02651 361 Gene3D Thaumatin 33 250 IPR037176 -
Spst2g02651 361 SUPERFAMILY Osmotin, thaumatin-like protein 33 251 IPR037176 -
Spst2g02651 361 SMART tha2 35 250 IPR001938 -
Spst2g02651 361 Pfam Thaumatin family 39 250 IPR001938 -
Spst2g02651 361 PRINTS Pathogenesis-related protein signature 82 93 IPR001938 -
Spst2g02651 361 PRINTS Pathogenesis-related protein signature 135 151 IPR001938 -
Spst2g02651 361 PRINTS Pathogenesis-related protein signature 34 46 IPR001938 -
Spst2g02651 361 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02651 Spst-Chr2 26115604 26117660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02651 18 285 Receptor kinase-like Gene Family AT5G38280 46.099 1.84e-77 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02651 - - gmx:100801173 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02651 2 26115604 26117660 Spst2g02651 2 26115604 26117660 ECH
Spst2g02651 2 26115604 26117660 Spst3g03787 3 87901625 87902528 ECH