Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2697 ATGCCGACGCCGGTCAGCATAGCAAGGCAATGCTTGACGGACGAGGCGGCGCGTGCGCTAGACGAGGCGGTGGCGGTAGCGCGCCGCCGCTGCCACGCGCAGACGACGTCGCTCCACGCCGTCTCGGCCCTGCTTGCGCTGCCAACCTCCTCGCTGCGCGAGGCCTGCGGCCGCGCAAGCGCCGCGAGGTTCTCCGGGGCGTACTCGCCGCGGCTGCAGTTCCGCGCGTTGGAGCTCTCCGTGGGAGTGTCGCTGGACCGGCTTCCGTCGTCGAAGGGTGGGGGCGGGGGCGAGGAGGAACCGCCGGTGTCGAACTCGCTCATGGCGGCCATCAAGCGGTCGCAGGCGAACCAGCGGCGGCAGCCGGAGAGCTTCCACGCGTTCCAGCAGAGCCAGCACGGGGGAACGGCGTCGTTTCTGAAAGTTGAGCTGAAGCACTTCGTTTTGTCAATCCTCGACGATCCTATCGTGAGTCGCGTTTTCGCAGAAGCAGGGTTTCGAAGCTGTGACATCAAACTCGCGCTGCTTCAACCACCGCTTCCTCCGGTTCAGCACCGGTTCGCCAGAGCTCCTCCAGTTTTTCTCTGCAACCTCGAACCGGACCGGCCCGACGAAAATATTCGCAGGATCGCGGAGGTGCTGTCGAGAAAGAGCAAGCGAAACCCTTTATTGATGGGTGTTTATGCAAAGAGTGCTCTGAGGGGTTTTGTTGAGATGGTTCAAAAGGGTCGAGGGGGTTCGGTTTTGAGTTCGGAGTTGAGGGTGGTTTGTTTGGAGAGGGAGATTGGGGAATTTTTGAAAAGGGGTGGGAGTGGGGAAGAGGTGGTGGGTGTGAAGTTGAAGGAGTTGGAGCAGCAATGCGAGGGTTATTCTGGTACTGGGGTTGTTAGTTTCGGGGAGGTTGAGGTTTTTGTAGGGGAGGATGTGGATGTTGATGCTGTTAGGTTTGTTGTCTCGGGGCTAACGAGGTTGTTAAAGATTGGTGGCGAGAAGGTTTCGTTGCTGGGTGTGGCTGAAACCTCTCACGCCTATTCCAAGTTCTTGAGCTTGTTTCCTAATGTGGAAAACGATTGGGATCTTCATTTGCTCACTGTCACTTCCGCCACTCCTTCTATGGAAGGACTCTACTCTAAGTCCAGCTTGATGGGGTCTTTTGTTCCATTTGGTGGGTTCTTTTCTACACCTGAAATCAGAAGTCCCGTGAACTCCACGAATGGATCTTTTACCCGTTGTGACAAATGCAATGAAAAATGTGAACAAGAAGTTGCTGATATTCTGAAGGTAGGTCCTTCGTCTAGTAACTCAACAAGCTCATCCTGGTTACAAAAGGTTGTTAATGTGGACACGCATAGAGGATCAGATGTCACAAAGACCAGTGAAGAAAATACAAGTTTGAATGAGAAGATCTTGGGATTTCAAAACAAATGGAGTGATATTTGTCAGCGTCTTCATCACAAAAGCTCACTGCCTCACTTTGATATTTCTCTGACAAGGTCCCAAGCTCCAATACTTGAGCCTTTACGTTTTGGTCCAGGTTTTAAGGAAAGCAGCAGTAAAGATCCATCACGCAGTGAATTCCAATATTCTACTCAAGTTTCTTACATGCCCAAAGGGTTGCCTATTACTTTTCCATTACCTTCTGATTCAGTCAGTGTTCGTGCTGTAACTGGTAATGATTCAAAAGTCTCAGAGACACTGCAAATTGATGGGAAGACCCCTAGGGTCGTCCCTTCTAGTGTGTTTGACCACAGATCATCTTTATCCCATACACCTGTGACCACAGATTTAGGATTGGGAACGTTATATACATCAACCTCTCAGTATCCAGATACCCCAAAACTACAAGATCAAAGAAAGCATCTTCAGCAATTGTCAGACTCTATTTCAACTGATTGTGATGCTATTAATGAAAATACTTCACACCAAATTCCTAGATCTTCTTGGTCTGGTTCAAATTTTGATGGAAAAATTGATTTAGCAGATTTCAAGTCTCTTAATCGACTTCTCACTGAAATGGTTGGCTGGCAGGATGAAGCCATATGTGCTATCAGTCAAACTTTGTCCCTTTGTAAAGCTGGTTCAGGGAAGAGTAGAGGCTCACAAGGTAGAGCAGACATATGGTTGGCTTTCCTTGGACCAGATAGACTTGGCAAAAGGAAAATTGCTTCTGTTCTTGCAGAGATTATCTTTGGAAACGCTGAAAGCCTAATCTCTGTGGATCTGGGCTTCCAGAACAGCTTTTACCCATTGAACTCAGTTTTTGAATGCCAAAAATCAAGTTGTTATGATGCGCTTAGGAGGAAGACAATTGTGGACTATATTGCTGGAGAGTTGAGTAAAAAGCCCCATTCTGTTGTCTTTCTTGAAAACGTAGATAAAGCTGATTTTCTGGTGCAGACTAGTTTGTTGCAGGCAATAAAAGCTGGCAAATATCCAGATTCGCATGGAAGGGCAATTAACATTAATAACACAATCTTTCTTGTGGCCTCAACTGTCTGTAAAGGTAGTGGTTGTTTGGTTTCAGATGAGTCTAAAATGTTTTCGGAGGAAAGAATCCTTGAAGCCAAAAGATGTCAAATGCAATTATTACTAGGACATGCTTCCGAGGATGCCAAAACAATTGGTAGCACAAATGTCAAGGTTGTACCTAGAAAAGGTTTTTCCAAATCATCATCTCTGAACAAAAGAAAGCAGACTGATATTAGTGAGTCCAAGAAGGGAACAACAAGCAAGATGCAGAGACAGGACAGCGAGACATCTCGATCCTATCTGGATCTGAACATGCCTGTGGAGGAGAGTGATGAGGGTGTCAATGACAATGACCAAGAAAGTGAATCCGTAACAGAAAACACAGACACCTGGTTAAGTGACTTCTTTGATCAAATTGATGAGAAAGTGGTGTTTAAGCCATTCAACTTTGATAAGCTTGCTGAGCAAGTATTAAAAAGCATTGGCATACTATTTCAAAGGACGTTCGGATCAGAGCTTCAGCTAGAAATTGATTATGAGGTAATGACACACATACTTGCAGCTGCTTGGTTATCAGACAAAAAAAATGCAGTGGAGAATTGGGTTGAAAATGTTCTTGGCAGATGCTTTGCCGAAGCTCAGCAGAAGTACCATTCTGTATCTCAATATGTTGTGAGACTGGTTAACTGTGAATCCATTTTTGTGGAAGAGCAAGCTCCTGGTGTATGCCTTCCAGCTAGAATTAACCTGGACTAA 3225 0.4673 MPTPVSIARQCLTDEAARALDEAVAVARRRCHAQTTSLHAVSALLALPTSSLREACGRASAARFSGAYSPRLQFRALELSVGVSLDRLPSSKGGGGGEEEPPVSNSLMAAIKRSQANQRRQPESFHAFQQSQHGGTASFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALLQPPLPPVQHRFARAPPVFLCNLEPDRPDENIRRIAEVLSRKSKRNPLLMGVYAKSALRGFVEMVQKGRGGSVLSSELRVVCLEREIGEFLKRGGSGEEVVGVKLKELEQQCEGYSGTGVVSFGEVEVFVGEDVDVDAVRFVVSGLTRLLKIGGEKVSLLGVAETSHAYSKFLSLFPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPEIRSPVNSTNGSFTRCDKCNEKCEQEVADILKVGPSSSNSTSSSWLQKVVNVDTHRGSDVTKTSEENTSLNEKILGFQNKWSDICQRLHHKSSLPHFDISLTRSQAPILEPLRFGPGFKESSSKDPSRSEFQYSTQVSYMPKGLPITFPLPSDSVSVRAVTGNDSKVSETLQIDGKTPRVVPSSVFDHRSSLSHTPVTTDLGLGTLYTSTSQYPDTPKLQDQRKHLQQLSDSISTDCDAINENTSHQIPRSSWSGSNFDGKIDLADFKSLNRLLTEMVGWQDEAICAISQTLSLCKAGSGKSRGSQGRADIWLAFLGPDRLGKRKIASVLAEIIFGNAESLISVDLGFQNSFYPLNSVFECQKSSCYDALRRKTIVDYIAGELSKKPHSVVFLENVDKADFLVQTSLLQAIKAGKYPDSHGRAININNTIFLVASTVCKGSGCLVSDESKMFSEERILEAKRCQMQLLLGHASEDAKTIGSTNVKVVPRKGFSKSSSLNKRKQTDISESKKGTTSKMQRQDSETSRSYLDLNMPVEESDEGVNDNDQESESVTENTDTWLSDFFDQIDEKVVFKPFNFDKLAEQVLKSIGILFQRTFGSELQLEIDYEVMTHILAAAWLSDKKNAVENWVENVLGRCFAEAQQKYHSVSQYVVRLVNCESIFVEEQAPGVCLPARINLD* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2697 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 657 1012 IPR027417 -
Pvu8g2697 1074 MobiDBLite consensus disorder prediction 887 949 - -
Pvu8g2697 1074 MobiDBLite consensus disorder prediction 896 912 - -
Pvu8g2697 1074 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1073 - -
Pvu8g2697 1074 MobiDBLite consensus disorder prediction 932 946 - -
Pvu8g2697 1074 Gene3D - 639 874 IPR027417 -
Pvu8g2697 1074 ProSiteProfiles Clp repeat (R) domain profile. 8 182 IPR004176 -
Pvu8g2697 1074 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1073 - -
Pvu8g2697 1074 Gene3D - 10 177 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2697 Pvu-Chr8 57362866 57368759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2697 - - gmx:100804458 1686.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2697 8 57362866 57368759 Pvu8g2697 8 57362866 57368759 ECH
Pvu8g2697 8 57362866 57368759 Pvu1g2521 1 50331097 50336473 ECH
Pvu8g2697 8 57362866 57368759 Pvu8g2313 8 53685811 53691299 ECH
Pvu6g0717 6 18741384 18748029 Pvu8g2697 8 57362866 57368759 ECH
Pvu1g2521 1 50331097 50336473 Pvu8g2697 8 57362866 57368759 ECH
Pvu7g2771 7 50730076 50734392 Pvu8g2697 8 57362866 57368759 ECH
Pvu6g0717 6 18741384 18748029 Pvu8g2697 8 57362866 57368759 PCT