Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2521 ATGCCCACGCCCGTCGCAGCGGCGCGTCAATGCCTAACCGCCGACGCCGCTCGCGCCCTCGACGAGGCCGTCTCCGTCGCCCGCCGACGTGGCCACGCCCAGACCACCTCTCTCCACGCCGTCTCTGCCCTGCTTTCCCTCCCCTCCTCCTCCCTACTTCGCGACGCCTGCTCACGCGCCCGCAACTGCGCGTACTCCCCACGCCTGCAGTTCAAGGCTCTCGACCTCTGCCTCTCCGTCTCCCTCGACCGCGCGCCGTCGTCGCACAGCCACCTTTCTTCCGACCACGACCCGCCCGTCTCCAACTCCCTCATGGCTGCCATCAAACGCTCCCAGGCCAACCAGCGCCGCCACCCTGACAACTTCCACTTCTATCACCACCAACAAACTCACCATAACTTAAACATAAACCAAAACCAAAACCACCAACAACCCTTTTCTGTTTCTTCCGTCAAAGTAGAGCTTCAGCATTTGATTCTGTCAATCCTCGACGACCCCGTCGTAAGCCGAGTTTTCGCCGAAGCCGGTTTCCGGAGCTCCGACATCAAACTCGCCATCCTCCGTCCTCTGCGCCCTCGCGGCCCGCCGATTTTCCTCTGCAATTTATCCGAGCCGCCGCGGCGGTTTCCTTTCTTCTTCGGTGGGGATGACGGTGGCGGCGAGAATTTCCGGCGAATCGGAGAGCTTCTGGTCCGGAGCCGGGGGCGAAACCCGCTGCTTCTTGGAGCGTGCGCCGGCGACGCTCTCCGGAGCTTTGTGGAGGCTGTGGAGAAGCGGAGGGAGGGGGTTTTGCCGGTGGAGTTGTCCGGGCTGAAGGTGGTTTGCATTGCGGAGGAGGTCGCGCGTGGGGACGTGGAGGGTGTGGGGAAGCGCGTTAGGGAGATTGGAAGCTTGGCGGAGCAGTGTGTGGGGCCTGGTGTTGTGGTGAGTTTCGGGGACTTGAAGGGTTTTGTGAGCGATGAAGAAGGTGGTGGTGAGGGTTTGAGGGGAGTGGTTGGGGAATTGGCGAAGCTGTTGCAGGTTCATTATGATAAGTTTTGGTTAATGGGTGCCGCTGCTAGTTATGAGAGTTACTTGAAATTCGTGGGGAAGTTTCCTTGCATAGAGAAAGAGTGGGATTTGCAGCTTCTGCCTATTACCTCTGTCAAGCCTTCTGAATCCTATCAACGCCCCAGGTCCAGCTTAATGGATTCATTTGTGCCATTTGGTGGCTTTTTTTCGTCACAGTCTGATTTGAAAGGTCCACAGAATGGATCGTTTTATTGTGTTCCGAACTGTCATCAGTGTGGTGAAAGGTGTGAACATGATGTCCCTGTTGCTTCTAAGGAAAGGTTTTCAGCTTCTTCAGCTGTCGATTCGCCTCAATCTAGCTTGCCTCCGTGGTTACAGATTGCAGAATTTGGCTCATCAAAGGGATTGAATGTTAAGACCAAAGATAATGATGTTTTGCTCGATAGTAGTGAATCTGGGCCACTGCATAAGAACTTGGACAAGTTATCCCAGCACCTGCACCAGCGAGATACAAATACTTTTCAAACTGTTGTGGGGTTTCAGTGTGGGGCTGACAAGAAAAAGGAAGATGCTGACCATTGCAGCAGCAAAATCACAGACAAATCACCTAGTGAATACATCACTCTCAACTCCAATGTATCTGTTGGCATGCAAATGATGCCTGTGTCACACTCAAGTAGTCCTTTTCCTGCAGTTTTCAAGGCAAAGCAGGAGAAATATACTTCAAAACTTGCTGAGATGTTTCAGAAAGTGGAAGATCACGAGTCAGGTGACCTAAGATCGTGCAACATGTCCAATTCAAGCGTGTGTGATGGAAGTCAAATGTCTCCCACATCTGTAACTTCTGTAACCACAGACCTCGGGTTAGGAATATGCTCTTCTCCTACCAGCAATAAGCTAAAAAAACCTACAGTTCAGTATACAATGGAGCCTCCAAAGGAAATCCCAAGTCGGTTTTCTTCAAACTTCAATTTGGCTGATGGGAATATCTTGAAGCATCCATCGCAGTCTTCATCCTGCTTAAGTTTCGACTATTGTGGACAAGTCGATGCTAAAAATCCCAAGTTTCTTTTTGAAGCTCTTTCCAAGGAGGTAAGCTGGCAAGACGAAGCTTTACAGGCTGTCATCAAAACAATAGTTTGCAGCTCAACAAAAAGGGTTAAACACCGTGGAGAAAATCAGCCTGGAGACATCTGGATGAATTTTGTTGGACCTGATAGACTTGGTAAAAAGAAAATTGCCGTTTCTCTAGCCGAGTTATTGTATGGCAGCCGGGAAAGCTTTATTTTTGTGGATCTAAGTTCTGAAGAAATGAAAGGATGCAATGTGAAATTCAGAGGGAAAACTACCCTTGATTTTATTGTAGGGGAGTGTTGTAAGAAACCCTTGTCTGTGGTTTTCCTCGAAAATGTAGACAAGGCAGATATTCTAGCTCAAAAAAGTTTGTCTCAGGCCATCAAGACAGGAAAGATTACAGACTCGCATGGACGAGAAGTTAGTGTAAACAATACAGTGTTTGTTTTATCTTTCTCAGATTACCAAAATAGTGGGGAACCTTCCAACTATTCTTTGGAAAGAATACTGAAGGCAAAGGGGGGAGGTATCAAGCTACACGTTGAACATGTGACTGGAGACAACAGAAACCAAAGCAGAGGTGTCACTAACAATTCAATGGATGCCATGCCTAATCTAAATTTCCTAAACAAACGTAAGTTGTTTGGTGACGTTGAATTTCATGATCCAGATATTCTCTCTGATACAGCTAAAAGGGCACATACAGCATCAGGTTGGCAGTTAGATTTGAATCTCCCAGCCGAAGAGAATGAACAGAAACTAACAAATGAACCTGAACATGTCTCAACTGAGAACCGAAGCCTTTGGTTGCAAAATTTGTGTGATCTGGTTGATGAAACAGTTGTTTTTAAACCTTGTGATTTTGATGCACTTGCGGATAGATTGTTGAAAGTGATCAGAGGTAACTTCAACAAGATTCTTGGACCCGAATGTGTATTACAGATTCAGACAGAAGTGATGGACCAATTGCTTACAGCTCAATATGTCTCGGACAGGAATTCGGAGGTGGAGAACTGGGTGGAGGAAGTTCTTTGTGGAGGATTTACAGAAATACAGAGAAGGTATAACCTCACATCTAGTTCTATTGTAAAACTTGCTACGTATCCAGAACAAGCTCCTGGTGTACACCTTCCCCCAAGGATAATTTTAGATTGA 3240 0.4799 MPTPVAAARQCLTADAARALDEAVSVARRRGHAQTTSLHAVSALLSLPSSSLLRDACSRARNCAYSPRLQFKALDLCLSVSLDRAPSSHSHLSSDHDPPVSNSLMAAIKRSQANQRRHPDNFHFYHHQQTHHNLNINQNQNHQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGPPIFLCNLSEPPRRFPFFFGGDDGGGENFRRIGELLVRSRGRNPLLLGACAGDALRSFVEAVEKRREGVLPVELSGLKVVCIAEEVARGDVEGVGKRVREIGSLAEQCVGPGVVVSFGDLKGFVSDEEGGGEGLRGVVGELAKLLQVHYDKFWLMGAAASYESYLKFVGKFPCIEKEWDLQLLPITSVKPSESYQRPRSSLMDSFVPFGGFFSSQSDLKGPQNGSFYCVPNCHQCGERCEHDVPVASKERFSASSAVDSPQSSLPPWLQIAEFGSSKGLNVKTKDNDVLLDSSESGPLHKNLDKLSQHLHQRDTNTFQTVVGFQCGADKKKEDADHCSSKITDKSPSEYITLNSNVSVGMQMMPVSHSSSPFPAVFKAKQEKYTSKLAEMFQKVEDHESGDLRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLGICSSPTSNKLKKPTVQYTMEPPKEIPSRFSSNFNLADGNILKHPSQSSSCLSFDYCGQVDAKNPKFLFEALSKEVSWQDEALQAVIKTIVCSSTKRVKHRGENQPGDIWMNFVGPDRLGKKKIAVSLAELLYGSRESFIFVDLSSEEMKGCNVKFRGKTTLDFIVGECCKKPLSVVFLENVDKADILAQKSLSQAIKTGKITDSHGREVSVNNTVFVLSFSDYQNSGEPSNYSLERILKAKGGGIKLHVEHVTGDNRNQSRGVTNNSMDAMPNLNFLNKRKLFGDVEFHDPDILSDTAKRAHTASGWQLDLNLPAEENEQKLTNEPEHVSTENRSLWLQNLCDLVDETVVFKPCDFDALADRLLKVIRGNFNKILGPECVLQIQTEVMDQLLTAQYVSDRNSEVENWVEEVLCGGFTEIQRRYNLTSSSIVKLATYPEQAPGVHLPPRIILD* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2521 1079 Gene3D - 675 884 IPR027417 -
Pvu1g2521 1079 PANTHER PROTEIN SMAX1-LIKE 8 1 1078 - -
Pvu1g2521 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 990 IPR027417 -
Pvu1g2521 1079 Pfam Clp amino terminal domain, pathogenicity island component 153 187 IPR004176 -
Pvu1g2521 1079 Gene3D - 10 189 IPR036628 -
Pvu1g2521 1079 ProSiteProfiles Clp repeat (R) domain profile. 8 195 IPR004176 -
Pvu1g2521 1079 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2521 Pvu-Chr1 50331097 50336473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2521 - - gmx:100800606 1765.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2521 1 50331097 50336473 Pvu8g2313 8 53685811 53691299 ECH
Pvu1g2521 1 50331097 50336473 Pvu1g2521 1 50331097 50336473 ECH
Pvu7g2771 7 50730076 50734392 Pvu1g2521 1 50331097 50336473 ECH
Pvu6g0717 6 18741384 18748029 Pvu1g2521 1 50331097 50336473 ECH
Pvu8g2697 8 57362866 57368759 Pvu1g2521 1 50331097 50336473 ECH
Pvu1g2521 1 50331097 50336473 Pvu6g0717 6 18741384 18748029 ECH
Pvu1g2521 1 50331097 50336473 Pvu8g2697 8 57362866 57368759 ECH
Pvu1g2521 1 50331097 50336473 Pvu8g2313 8 53685811 53691299 PCT