Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2313 ATGCCTACGCCGGTTGCAGTAGCGATACAATGCCTGACGGCGGAGGCCGCAAAAGCGCTCCACGACGCCGTATCTGTGGCCCGACGGCGGGGCCACGCCCAGACCACTTCACTGCACACTGTGTCCGCTATGCTCTCCCAGGCGTCCTCTGCCTTGCGCGACGCATGCGCACGCGCCCGAAGCGCCGTCTTCTCGACGCGCCTCCAATTCAGAGCCCTCGAACTCTCCCTCAGCGTGTCACTCGACCGCGTGCCGTCAAACTCTTGCGGCAGCGACGAGCCTCCGGTGTCGAACTCGCTCATGGCCGCCATCAAGCGGTCGCAAGCCGCGCAGCGCCGCAAGCCGGAGAACTTCCACCTCCAGCAGCCTTGTTCTGTTAAGGTGGACCTGCAGCACCTGATCCTGTCCATCCTCGACGATCCCGTCGTGAGTCGCGTCTTCGCCGAAGCGGGTTTTCGGAGCTCCGAAATCAAACTCGCCATCATCCGTCCCCTCACCCGTCTCATGCACCAACAATCTCCCCTTCGCCGGAGCTTCCCCTTCCCTTTCTCCGCCGAGGACACCGACGATCTTCGGAGGATCGCGGAGGTGCTATCCCGGAAGAGAGGCAGAAATCCCATGCTTTTGGGTGCATGTGCACGTGATGCGCTGTGGAGTTTCGCGGAAGCAGTGGAGAGGCAAAACAGCGCCGTTTTACGGGAGTTGTGCAGTTTGCGCGTGGCGCGCATTGGAAGAGAGGTTATGGAGTTTGTTAGCGGGAGCCGTGGAGAAGAGGATGTGCGTTTGAGGTTTGAAGAGATCGGAGATATGGTGGAGAAGCGCGTGGGGAAAGGTATAGTGGTGGATGTGGGAGAGTTGGAGGATTTGGTGAATGAGAAAAATGGTTGGGGTGAGAGTGAGGCAGTTAGGTATGTTGTTGTAGGGATAGGAAAGTTGTTGGAAGTTAGTTATGGAAGGTTATGGCTCATTGGTGCTGCCACAAACTATGAAAGATATACGAAATTTGTAGGAAGGTTTCCTTCTATAGAGAAGGATTGGGACTTGCACCTTCTGCCAATTCTCTCTCTACGTTCTTCATTCTCTGCTCAATCATATCACACTCGCAGGTGTGAGCCAAGTATTCTCGCTGCTTCAACTGTTGATCTATTCCTCCCTAACTTACCTCCACCTCCACGATTGCACATTTCTGAATCAGGATCAGCAAAAGGATTAAATCTTAAGATAGAAGATGGTGTTGAGCTGAATAGTAGTGAATCTGCAACACATAAGAACTTGGACAAGATGTGCCAGTATCTGCATAAAATATTCCCTGATTCAAATAACAGTCCAACAGTTATGGCATTCCAATATTGTGACAACAAAGGAAAAGATGCTAACAACCCCAGAAATAAACTTACACACACATCATCAAGTGAATACAACAATATCAACTCAGAAGTGCCTGTTGGTAAGCAAACGATTTCCACATCACAATCAGGCAGTTTTTTTCCTATGGATTTCGATGCAGGGCATGAGAAGTATACTTCAACACTTTCACAGAAGTTCCAGAGAGTGGAATGTTTGGATTCAAGGGATCTAGGATCATGCAACATGTGCACTTCCATTGTTTGTGATGGAAGCCAGATGTCTCCAACTTCTGTGATTTCTGTAACCACAGATTTGGGGTTAGGAATGTGCTCCTCTCCTACCAGCAATAAATCTAACAGACCTTCCAGTCAATTTACAACGGAACATCCAAAGGAAACCTCAAGTTTATTTTCTTCAAAATTTAATGTTGCTGGTGGAAATATCTTGAAACACCCATCTCAGCCATCAACCTTCTTAAGTTTTGACTTTTGTAGACAGGTCGATGCAAGGAATCCCAAAATACTTTTCGATGTCCTTACCAAGGAGGTTAGCTGGCAGGATGAAGCCATTAGTGTCATCAGCAAAACAATAGCTGGCAGCCATACAAAAAAGGTTGGTGCAAATCATAGGGGTGACGTGTGGATGAATTTTGTTGGACCTGATAGGAATGGTAAAAGGAAAATTGCTGTTACTCTAGCTAAGTTCTTGTATGGAAGCCAGGATAGCTCTATTTTTGTGGATCTAAGTTCTAAAGAAATGAAAGGATATGTGAAATTCAGAGGAAAGACTACTCTTGATTTAATTGTGGGTGAATATTGCAAGAACCCCTTCTCTGTGGTCTTCCTAGAAAATGTAGACGAGGCTGATGTGTTAGTTCAAAATAGTTTGTCTCAAGCCATGAAAACTGGAAAGCTTACTGACTCACGTGGAAGAGAAGTGGGTGTAAACAATGCAATATTTGTGACTTCTTTCTCTGGTCACCAAGCAAGGGAACCTTCCAACTGTTCTGAGAGAATAGCAAAGGTAAAAGGGAGGCCTATCAAAATAACAGTTGAACATGTGAGTGCAGACATCAAAAGCCAAAGTGTTACTGCTTCTGATGGTTCAATAGATAACATTCCCAATCCAGTTTTAGCAAATAAACGAAACTTCCTTAACCACAATGAATTTCAGGATCAGCACTTAATCTCAGACAAGGCTAAAAGACTACATACAACACCGAATTGGCATTTAGATTTGAATCTTCCAGCTGAAGACAATGAACCTCAAGTTCAACAAATGAATGATGGAAACTTGGAACATGCATTAACTGAGATCCCAAACCTTTGGTTGCAAGATTTGTATGAACAGGTTGATGAAACAGTTGTTTTTAAACCTTTTAATTTTGATGCACTTGCGGATAGAGTGGTGAATGTGATCACAAGTAGCTTCCACAAAACTATTGGACCTGAATGTTCCTTACAGATAGAATCAGAAGTCATGGACCAGTTGCTTGCAGCTGCATACGTATCAGATGGAGATAAGGACATAGAAAATTGGGTAGAACAAGTTCTATGTGGAGGATTTACAGAAGTACAGAGAAGGTACAACCTTACTGGTTGTTTTACGGTGAAACTTGCTACATGTTCGCATCAAGAATCAAATGTGTACCTTCCTCCAAGTATAACAATGGATTAA 3024 0.4554 MPTPVAVAIQCLTAEAAKALHDAVSVARRRGHAQTTSLHTVSAMLSQASSALRDACARARSAVFSTRLQFRALELSLSVSLDRVPSNSCGSDEPPVSNSLMAAIKRSQAAQRRKPENFHLQQPCSVKVDLQHLILSILDDPVVSRVFAEAGFRSSEIKLAIIRPLTRLMHQQSPLRRSFPFPFSAEDTDDLRRIAEVLSRKRGRNPMLLGACARDALWSFAEAVERQNSAVLRELCSLRVARIGREVMEFVSGSRGEEDVRLRFEEIGDMVEKRVGKGIVVDVGELEDLVNEKNGWGESEAVRYVVVGIGKLLEVSYGRLWLIGAATNYERYTKFVGRFPSIEKDWDLHLLPILSLRSSFSAQSYHTRRCEPSILAASTVDLFLPNLPPPPRLHISESGSAKGLNLKIEDGVELNSSESATHKNLDKMCQYLHKIFPDSNNSPTVMAFQYCDNKGKDANNPRNKLTHTSSSEYNNINSEVPVGKQTISTSQSGSFFPMDFDAGHEKYTSTLSQKFQRVECLDSRDLGSCNMCTSIVCDGSQMSPTSVISVTTDLGLGMCSSPTSNKSNRPSSQFTTEHPKETSSLFSSKFNVAGGNILKHPSQPSTFLSFDFCRQVDARNPKILFDVLTKEVSWQDEAISVISKTIAGSHTKKVGANHRGDVWMNFVGPDRNGKRKIAVTLAKFLYGSQDSSIFVDLSSKEMKGYVKFRGKTTLDLIVGEYCKNPFSVVFLENVDEADVLVQNSLSQAMKTGKLTDSRGREVGVNNAIFVTSFSGHQAREPSNCSERIAKVKGRPIKITVEHVSADIKSQSVTASDGSIDNIPNPVLANKRNFLNHNEFQDQHLISDKAKRLHTTPNWHLDLNLPAEDNEPQVQQMNDGNLEHALTEIPNLWLQDLYEQVDETVVFKPFNFDALADRVVNVITSSFHKTIGPECSLQIESEVMDQLLAAAYVSDGDKDIENWVEQVLCGGFTEVQRRYNLTGCFTVKLATCSHQESNVYLPPSITMD* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2313 1007 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1005 - -
Pvu8g2313 1007 PANTHER PROTEIN SMAX1-LIKE 8 1 1005 - -
Pvu8g2313 1007 Gene3D - 9 164 IPR036628 -
Pvu8g2313 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 918 IPR027417 -
Pvu8g2313 1007 SUPERFAMILY Double Clp-N motif 12 160 IPR036628 -
Pvu8g2313 1007 Pfam Clp amino terminal domain, pathogenicity island component 23 54 IPR004176 -
Pvu8g2313 1007 Pfam Clp amino terminal domain, pathogenicity island component 128 161 IPR004176 -
Pvu8g2313 1007 Gene3D - 603 822 IPR027417 -
Pvu8g2313 1007 ProSiteProfiles Clp repeat (R) domain profile. 9 167 IPR004176 -
Pvu8g2313 1007 MobiDBLite consensus disorder prediction 561 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2313 Pvu-Chr8 53685811 53691299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2313 - - pvu:PHAVU_008G223600g 1997.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2521 1 50331097 50336473 Pvu8g2313 8 53685811 53691299 ECH
Pvu7g2771 7 50730076 50734392 Pvu8g2313 8 53685811 53691299 ECH
Pvu6g0717 6 18741384 18748029 Pvu8g2313 8 53685811 53691299 ECH
Pvu8g2697 8 57362866 57368759 Pvu8g2313 8 53685811 53691299 ECH
Pvu8g2313 8 53685811 53691299 Pvu8g2313 8 53685811 53691299 ECH
Pvu1g2521 1 50331097 50336473 Pvu8g2313 8 53685811 53691299 PCT