Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2167 ATGGCAACAGAGACATTTCTATTCACCTCTGAATCCGTCAATGAGGGCCACCCTGACAAGCTGTGTGACCAGATCTCAGACGCAGTGCTTGATGCCTGCCTTGAACAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACTAACATGGTCATGGTCTTCGGAGAGATTACAACCAAAGGCAACATAGACTATGAGAAGATTGTTCGCGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTAGGTCTTGATGCTGATAAATGCAAGGTGTTGGTGAACATTGAGCAGCAGAGTCCTGATATTGCTCAGGGTGTGCATGGCCACTTCACCAAGCGCCCAGAAGAAGTTGGTGCTGGTGACCAGGGTCATATGTTTGGTTATGCCACTGATGAAACCCCTGAATACATGCCACTGAGCCATGTCCTTGCAACCAAACTAGGAGCTCGCCTTACTGAGGTTAGGAAGAATGGAACCTGTGCTTGGTTGAGACCAGATGGTAAGACACAAGTGACAGTAGAGTACTACAATGAGAATGGTGCCATGGTTCCGGTTCGTGTCCACACTGTCCTCATTTCCACCCAGCATGATGAGACTGTCACTAATGAACAAATTGCTGCGGATCTTAAGGAGCATGTTATCGAGCCTGTGATTCCTAAGAAGTACATGGATGACAAGACCATCTTCCACCTTAATCCTTCTGGTAGATTTGTCATTGGTGGCCCTCATGGTGATGCTGGTCTCACTGGGAGAAAGATTATCATTGATACTTATGGTGGGTGGGGTGCACATGGAGGCGGTGCTTTCTCTGGAAAGGACCCTACTAAGGTTGATAGAAGTGGTGCCTATGTTGCAAGACAAGCAGCAAAGAGTATTGTAGCAAGTGGACTTGCACGCAGGTGCATTGTTCAAGTCTCCTATGCAATTGGTGTTCCAGAACCATTGTCAGTCTTTATTGACAGTTATGGAACTGGAAAGATTCCCGACAAGGAGATTCTTCAACTTGTGAAGGAGAATTTTGACTTCAGGCCTGGAATGATCACCATTAACTTGGATCTCAAGAGGGGTGGCTACAGGTTCCTCAAGACAGCTGCTTATGGACACTTTGGAAGAGATGACCCTGATTTCACCTGGGAACTTGTCAAGCCACTCAAGTGGGAGAAGCCTCAAAATTAA 1185 0.47 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNEQIAADLKEHVIEPVIPKKYMDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFIDSYGTGKIPDKEILQLVKENFDFRPGMITINLDLKRGGYRFLKTAAYGHFGRDDPDFTWELVKPLKWEKPQN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2167 394 CDD S-AdoMet_synt 7 382 - -
Pvu7g2167 394 Gene3D - 6 244 - -
Pvu7g2167 394 Gene3D - 119 382 - -
Pvu7g2167 394 Gene3D - 13 281 - -
Pvu7g2167 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Pvu7g2167 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu7g2167 394 SUPERFAMILY S-adenosylmethionine synthetase 242 390 IPR022636 GO:0004478|GO:0006556
Pvu7g2167 394 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu7g2167 394 TIGRFAM metK: methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu7g2167 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Pvu7g2167 394 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Pvu7g2167 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Pvu7g2167 394 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Pvu7g2167 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 393 - -
Pvu7g2167 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu7g2167 394 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Pvu7g2167 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2167 Pvu-Chr7 44920078 44923316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2167 K00789 - gmx:100777770 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2303 1 48499439 48501607 Pvu7g2167 7 44920078 44923316 ECH
Pvu7g2167 7 44920078 44923316 Pvu7g2167 7 44920078 44923316 ECH
Pvu3g1245 3 29899824 29900925 Pvu7g2167 7 44920078 44923316 ECH
Pvu1g2240 1 47985277 47986575 Pvu7g2167 7 44920078 44923316 ECH
Pvu1g2241 1 47986691 47987407 Pvu7g2167 7 44920078 44923316 PCT
Pvu7g2167 7 44920078 44923316 Pvu1g2242 1 47995129 47997685 PCT