Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2240 ATGGCAACTGAAACCTTTCTATTCACATCTGAGTCCGTGAACGAGGGTCACCCCGACAAGCTGTGCGACCAGATCTCTGATGCAGTGCTCGACGCGTGCCTTGCACAAGACCCTGACAGCAAGGTTGCCTGCGAAACATGCACCAAGACAAACATGGTCATGGTCTTTGGGGAGATCACAACCAAGGCCGAAGTAGACTACGAGAAGATTGTCCGTGAGACATGCCGCAGCATTGGCTTCATCTCTGATGATGTTGGTCTTGATGCTGACAAGTGCAAGGTGTTGGTCAACATTGAGCAGCAGAGCCCTGATATCGCCCAGGGTGTGCACGGCCACTTCACCAAGCGCCCGGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGACGAAACCCCTGAATACATGCCGCTCAGCCAT 432 0.5394 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAEVDYEKIVRETCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2240 144 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Pvu1g2240 144 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 2 144 - -
Pvu1g2240 144 Gene3D - 15 111 - -
Pvu1g2240 144 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Pvu1g2240 144 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 144 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2240 144 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Pvu1g2240 144 SUPERFAMILY S-adenosylmethionine synthetase 116 143 IPR022636 GO:0004478|GO:0006556
Pvu1g2240 144 Pfam S-adenosylmethionine synthetase, central domain 119 143 IPR022629 GO:0004478|GO:0006556
Pvu1g2240 144 Gene3D - 112 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2240 Pvu-Chr1 47985277 47986575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2240 K00789 - pvu:PHAVU_001G2166001 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2240 1 47985277 47986575 Pvu1g2240 1 47985277 47986575 ECH
Pvu1g2240 1 47985277 47986575 Pvu7g2167 7 44920078 44923316 ECH
Pvu3g1245 3 29899824 29900925 Pvu1g2240 1 47985277 47986575 ECH