Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1245 ATGGCAGAGACATTTCTGTTCACCTCGGAGTCCGTGAACGAGGGACACCCAGACAAGCTCTGCGACCAAATATCGGATGCTGTTCTTGACGCCTGCCTTGAGCAAGATCCGGAGAGCAAGGTTGCGTGTGAGACATGCACCAAAACCAACTTGGTCATGGTCTTCGGAGAAATCACCACCAAGGCCGACGTTGACTACGAGAAGATCGTGCGTGACACCTGCAGGAACATCGGCTTTATCTCAAACGATGTGGGGCTTGATGCCGACAACTGCAAGGTCCTTGTGAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGTGTCCATGGCCACCTCACCAAAAGACCTGAAGAAATCGGTGCTGGCGACCAGGGTCACAT 380 0.5342 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGH 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1245 126 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Pvu3g1245 126 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 1 126 - -
Pvu3g1245 126 Gene3D - 12 117 - -
Pvu3g1245 126 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 126 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu3g1245 126 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1245 Pvu-Chr3 29899824 29900925 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1245 K00789 - pvu:PHAVU_003G1202001 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1245 3 29899824 29900925 Pvu3g1245 3 29899824 29900925 ECH
Pvu3g1245 3 29899824 29900925 Pvu1g2303 1 48499439 48501607 ECH
Pvu3g1245 3 29899824 29900925 Pvu7g2167 7 44920078 44923316 ECH
Pvu3g1245 3 29899824 29900925 Pvu1g2240 1 47985277 47986575 ECH