Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2241 GTTAGGAAAGATGGTACCTGCGCTTGGTTGAGGCCAGATGGTAAAACACAAGTAACTGTTGAGTACAACAATGACAACGGTGCCATGGTTCCAATCCGTGTTCACACTGTTCTAATTTCCACCCAACATGATGAGACTGTGAGCAATGACCAAATTGCTGCTGACCTTAAAGAGCATGTTATCAAGCCAGTCATTCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAACCCATCGGGTCGGTTCGTGATTGGTGGCCCCCATGGTGATGCTGGTCTCACTGGAAGAAAGATCATCATTGATACCTACGGTGGCTGGGGTGCTCATGGTGGTGGTGCCTTTTCAGGCAAGGACCCAACCAAGGTTGACAGAAGTGGTGCCTATATTGTGAGGCAGGCTGCAAAGAGCGTTGTGGCAAATGGGTTTGCCAGAAGGTGCATTGTCCAAGTTTCTTATGCCATCGGTGTCCCTGAGCCCTTGTCAGTCTTTGTTGACACCTATGGAACCGGAAAGATTCCTGATAAGGAAATTCTTCAGATTGTGAAGGAGAATTTCGACTTCAGACCTGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCCACAGGTTCCTGAAGACAGCTGCTTATGGACACTTCGGAAGGGATGACCCTGACTTCACATGGGAAGTGGTGAAGCCACTCAAGTCAGAGAAGCCTCGGGTCTAG 717 0.4895 VRKDGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGFARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKSEKPRV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2241 238 SUPERFAMILY S-adenosylmethionine synthetase 86 233 IPR022636 GO:0004478|GO:0006556
Pvu1g2241 238 SUPERFAMILY S-adenosylmethionine synthetase 1 85 IPR022636 GO:0004478|GO:0006556
Pvu1g2241 238 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 236 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2241 238 Gene3D - 89 125 - -
Pvu1g2241 238 TIGRFAM metK: methionine adenosyltransferase 1 232 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2241 238 Gene3D - 126 226 - -
Pvu1g2241 238 Gene3D - 1 88 - -
Pvu1g2241 238 Pfam S-adenosylmethionine synthetase, C-terminal domain 86 226 IPR022630 GO:0004478|GO:0006556
Pvu1g2241 238 ProSitePatterns S-adenosylmethionine synthase signature 2. 112 120 IPR022631 GO:0004478|GO:0006556
Pvu1g2241 238 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 1 236 - -
Pvu1g2241 238 Pfam S-adenosylmethionine synthetase, central domain 1 84 IPR022629 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2241 Pvu-Chr1 47986691 47987407 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2241 K00789 - gmx:100777770 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2241 1 47986691 47987407 Pvu7g2167 7 44920078 44923316 PCT