Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2303 ATGGATACCTTCTTGTTCACTTCTGAGTCGGTGAACGAGGGTCACCCTGACAAGCTTTGTGACCAAATTTCTGATGCAGTGCTTGATGCCTGTCTGGAGCAAGATCCAGAGAGCAAGGTTGCCTGTGAAACATGCACCAAGACCAACTTGGTCATGGTGTTCGGAGAGATCACAACTAAGGCCAATGTAGACTATGAGAAGATTGTACGCGACACTTGTCGTTCTATAGGCTTTGTGTCCGATGATGTTGGTCTTGATGCTGACAATTGCAAGGTGCTGGTCTACCTGGAACAACAAAGCCCTGATATTGCTCAGGGAGTCCATGGCCACCTCACCAAGCAACCCGAGGAGATAGGTGCTGGTGATCAGGGCCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTTATGCCTCTCAGCCATGTCCTTGCAACCAAGCTCGGTGCTCGCCTCACCGAAGTGCGCAAGAATGGTACATGCACATGGTTAAGACCTGATGGAAAAACCCAAGTTACTGTGGAGTATTACAATGACAATGGTGTTATGGTCCCAGTTCGCGTCCACACTGTCCTAATTTCAACCCAGCACGATGAAACTGTTACCAATGATGAGATTGCTGCTGATCTCAAAGAACATGTTATCAAGCCTGTTATACCAGAGAAGTACTTAGATGAGAAGACCATTTTCCATCTCAATCCATCAGGCCGGTTTGTCATTGGTGGTCCTCATGGAGATGCCGGTCTCACAGGGCGCAAAATCATCATTGACACATACGGTGGTTGGGGAGCTCATGGTGGGGGTGCCTTCTCTGGGAAGGATCCCACCAAGGTAGACAGAAGTGGAGCCTATATTGCTAGACAGGCTGCAAAGAGCATTGTTGCTAGTGCTCTTGCTAGAAGGTGTGTTGTGCAAATTTCATATGCAATTGGTGTTCCTGACCCCTTATCAGTGTTTGTTGACACTTACGGGACTGGAAAGATTCCAGACAAGGAGATTCTGAAGATTGTGAAGGAAAATTTTGATTTCAGGCCTGGAATGATTTCCATTAGTTTGGACCTCAAAAGGGGTGGAAATGGAAGGTTCTTGAAAACTGCTGCTTATGGTCACTTTGGAAGAGAGGACACTGACTTCACCTGGGAGGTGGTGAAGTCTCTCAAATGGGAGAAGCCCCAGGAGTAA 1182 0.4755 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVYLEQQSPDIAQGVHGHLTKQPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCTWLRPDGKTQVTVEYYNDNGVMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASALARRCVVQISYAIGVPDPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISISLDLKRGGNGRFLKTAAYGHFGREDTDFTWEVVKSLKWEKPQE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2303 393 CDD S-AdoMet_synt 5 384 - -
Pvu1g2303 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Pvu1g2303 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Pvu1g2303 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Pvu1g2303 393 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Pvu1g2303 393 Gene3D - 4 242 - -
Pvu1g2303 393 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Pvu1g2303 393 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Pvu1g2303 393 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2303 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 381 IPR022630 GO:0004478|GO:0006556
Pvu1g2303 393 SUPERFAMILY S-adenosylmethionine synthetase 240 389 IPR022636 GO:0004478|GO:0006556
Pvu1g2303 393 Gene3D - 11 279 - -
Pvu1g2303 393 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 1 393 - -
Pvu1g2303 393 TIGRFAM metK: methionine adenosyltransferase 5 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2303 393 Hamap S-adenosylmethionine synthase [metK]. 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2303 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pvu1g2303 393 Gene3D - 117 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2303 Pvu-Chr1 48499439 48501607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2303 K00789 - qsu:112025941 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2303 1 48499439 48501607 Pvu7g2167 7 44920078 44923316 ECH
Pvu3g1245 3 29899824 29900925 Pvu1g2303 1 48499439 48501607 ECH
Pvu1g2303 1 48499439 48501607 Pvu1g2303 1 48499439 48501607 ECH