Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1114 ATGCCCACATCAAAACCACTATATATATTACTTCTCCACAACACTTCTCTCCAAAACCATCCAACAAGGAATTCGAATATTGATTATTTTCCATCCTTTCCTATATTCATTCCCCAACTTTCAACCATGGCCCCTTCAACTCAATTCTCCACCACTCTCCTCTCACTATGTCTCTTCCAATTCATAGCAGGTTCGTATTCAGCGACATTCACCATTGTCAACAAGTGCAGCTACACTGTGTGGCCCGGCATATTATCCAGCGCCGGAATCTCGCCGCTCTCCACCACCGGCTTTGTTTTACAGCCCGGCGAGTCCAACGTTGTCGGCGTGCCACCCGCCTGGTCCGGCCGCCTCTGGGGGCGGACCCTCTGCTCACAAGACGCTGCCGGGAAATTCTCCTGCGTCACCGGCGACTGTGGCTCCGCCGTGGAATGCGCCGGAGGTAACGCCGCCCCGCCGGCCACGCTTGCAGAGTTCACGCTGAACGGAGCCGGCGGGCTGGATTTCTTCGACGTGAGCCTGGTCGACGGTTACAACCTGCCAATGATCGTGGAGCCCCAGGGCGCAACCGGCGGCGGAAACTGCACCGCAACGGGGTGCGTGGTGGACCTGAACACGCCGTGCCCCTCGGAGCTCAAAGTGACGAGCAGCGGTGAGGGCGTGGCGTGTAGAAGCGCGTGCGAAGCTTTCGATGATCCACAGTATTGCTGCAGTGGTGCTTACGCGACACCTGACACATGCAAACCCAGTTCCTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCTTATAGCTACGCTTACGACGATGGCTCCAGCACCTTCACTTGCGCTTCTGCTGATTATACCATCACTTTCTGCCCGCAACCCTCCACAAGTTCGATAAAATCGGGGAACCCAATGGCGGTGGAAACCTCTGGAGCTGATTTAGACGGAAGATACAACAGTGTTATGGCGGTGATTCTTTGTGTTTTTGTGGCGTTTGTGGCAACTCAATTTGGTGGCCTTTCACTGGCAGTGTCGTAA 1026 0.5536 MPTSKPLYILLLHNTSLQNHPTRNSNIDYFPSFPIFIPQLSTMAPSTQFSTTLLSLCLFQFIAGSYSATFTIVNKCSYTVWPGILSSAGISPLSTTGFVLQPGESNVVGVPPAWSGRLWGRTLCSQDAAGKFSCVTGDCGSAVECAGGNAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIVEPQGATGGGNCTATGCVVDLNTPCPSELKVTSSGEGVACRSACEAFDDPQYCCSGAYATPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPQPSTSSIKSGNPMAVETSGADLDGRYNSVMAVILCVFVAFVATQFGGLSLAVS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1114 341 PANTHER OS03G0233200 PROTEIN 53 308 IPR001938 -
Pvu2g1114 341 CDD TLP-PA 69 287 - -
Pvu2g1114 341 ProSiteProfiles Thaumatin family profile. 67 288 IPR001938 -
Pvu2g1114 341 PRINTS Pathogenesis-related protein signature 69 81 IPR001938 -
Pvu2g1114 341 PRINTS Pathogenesis-related protein signature 117 128 IPR001938 -
Pvu2g1114 341 PRINTS Pathogenesis-related protein signature 130 159 IPR001938 -
Pvu2g1114 341 PRINTS Pathogenesis-related protein signature 168 184 IPR001938 -
Pvu2g1114 341 PRINTS Pathogenesis-related protein signature 278 287 IPR001938 -
Pvu2g1114 341 SMART tha2 70 288 IPR001938 -
Pvu2g1114 341 Gene3D Thaumatin 68 288 IPR037176 -
Pvu2g1114 341 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 53 308 - -
Pvu2g1114 341 Pfam Thaumatin family 74 288 IPR001938 -
Pvu2g1114 341 SUPERFAMILY Osmotin, thaumatin-like protein 68 289 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1114 Pvu-Chr2 21830895 21833219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1114 49 293 Receptor kinase-like Gene Family AT5G38280 52.191 3.62e-85 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1114 - - pvu:PHAVU_002G107900g 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0181 9 3027281 3030753 Pvu2g1114 2 21830895 21833219 ECH
Pvu11g0350 11 2973199 2975463 Pvu2g1114 2 21830895 21833219 ECH
Pvu2g1114 2 21830895 21833219 Pvu2g1114 2 21830895 21833219 ECH
Pvu11g0351 11 2979669 2980781 Pvu2g1114 2 21830895 21833219 ECH
Pvu2g1114 2 21830895 21833219 Pvu3g2711 3 49099152 49100572 PCT