Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0181 ATGGATCAACTCAAACTATCACTTCAATTTTTACAAACACTTCATCTGTTACTGTTAGCATCAGGTGCCGTAGCAACAACAACGTTCACAGTGGTTAACAAATGCGATTACACAGTGTGGCCAGGCATTCTCTCAAACACAGGAATCGCGGAGCTTCCAACAACCGGTTTCCTTCTCCAACCCGGCGACTCCAAAACCGTAACTGCTCCAACCTCCTGGGGTGGCCGTTTATGGGGCCGCACTCTCTGCACGCAAGACGCCGCCGGAAAATTCTCCTGCGTGACCGGCGATTGTGGCTCCGGCAAGCTCGAATGTGCGGGCAACGGCGCTTTGCCACCGGCGACCTTGGCCGAGTTCACCCTCGACGCCGACGGAGGCCTCGATTTCTTCGACGTGAGCCTCGTGGACGGTTACAACGTGCCGATGCTGGTGGCTCCCAAGGGTGGGTCCGGCAATAACTGCACCAGCACGGGGTGCGTTGGAGACCTCAACGGCGCGTGTCCTTCGGAGCTTAGGGTTACGAGCGTGGATGGAAAACAGGGCGTGGCATGTAAGAGCGCGTGCGAGGCGTTCGGGTCCCCGCAGTATTGCTGCAAAGGCGCGTTTGGGACGCCCAACACTTGCAAGCCTACGGCGTATTCGCAGATTTTCAAGAACGCTTGCCCACGCGCCTACAGCTACGCGTACGATGACAAGACCAGCACTTTTACATGCGCTTCTTCTGCGGATTACACGATCACTTTTTGCCCTTCCCCTAAAGATAACCCCAGTCAGAAATCGTGGCAGGGGCAAAACCCGAAATCAGATAGCAGTGGTTCTTCTTCTTCTTCTGATTCGCCGCCACTTAACAATGGGACAATGGTGTATGTAGGTGCCATGGATGAAAGTGAATTATCATGGTCAGTAGGTACCCATGTGAGTGTGAAGGAATCTCAAGCCATTGCTGGTTTTGTCAGTATCACCATTGCTCTTTGGCTCTTGTGCCACTTATAG 993 0.5378 MDQLKLSLQFLQTLHLLLLASGAVATTTFTVVNKCDYTVWPGILSNTGIAELPTTGFLLQPGDSKTVTAPTSWGGRLWGRTLCTQDAAGKFSCVTGDCGSGKLECAGNGALPPATLAEFTLDADGGLDFFDVSLVDGYNVPMLVAPKGGSGNNCTSTGCVGDLNGACPSELRVTSVDGKQGVACKSACEAFGSPQYCCKGAFGTPNTCKPTAYSQIFKNACPRAYSYAYDDKTSTFTCASSADYTITFCPSPKDNPSQKSWQGQNPKSDSSGSSSSSDSPPLNNGTMVYVGAMDESELSWSVGTHVSVKESQAIAGFVSITIALWLLCHL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0181 330 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Pvu9g0181 330 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Pvu9g0181 330 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Pvu9g0181 330 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Pvu9g0181 330 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Pvu9g0181 330 CDD TLP-PA 28 249 - -
Pvu9g0181 330 ProSiteProfiles Thaumatin family profile. 26 250 IPR001938 -
Pvu9g0181 330 PANTHER BNAA02G17480D PROTEIN 18 277 - -
Pvu9g0181 330 PANTHER OS03G0233200 PROTEIN 18 277 IPR001938 -
Pvu9g0181 330 MobiDBLite consensus disorder prediction 253 282 - -
Pvu9g0181 330 Pfam Thaumatin family 33 250 IPR001938 -
Pvu9g0181 330 SMART tha2 29 250 IPR001938 -
Pvu9g0181 330 ProSitePatterns Thaumatin family signature. 89 105 IPR017949 -
Pvu9g0181 330 Gene3D Thaumatin 27 250 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0181 Pvu-Chr9 3027281 3030753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0181 1 268 Receptor kinase-like Gene Family AT5G38280 50.916 3.79e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0181 - - gmx:100780102 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0181 9 3027281 3030753 Pvu2g1114 2 21830895 21833219 ECH
Pvu9g0181 9 3027281 3030753 Pvu9g0181 9 3027281 3030753 ECH