Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2711 ATGTCTCCCTTCTCACATTCATCTCATCAATCCATCGTTTTTCTACTTATCCTTGCTTTCATAGGTTTGCGGCATGCAGGGATGGGAGTTTCAGCGACAACATTCACATTCGTCAACAAATGCGACCACACAGTGTGGCCGGGGATTCTAGGAAAACCGGATCTCGGAACATCGGGTTTCGAGCTCAAAAGGGGAAGCACGCGCACCTTCGACGCGCCACCGGGTTGGTCGGGGCGTTTCTGGGGCAGAACCGGTTGCCAGTTCGACGACTCGGGCCATGGAACATGCGCCACCGGCGACTGCGGCTCCGGCGAGGTGCTCTGCAACGGAAACGGCGCCACGCCGCCTGCCACGCTCGCCGAGTTCACGCTCGGGTCCGGGTCGCCAGACTACTACGACGTGAGCCTTGTCGACGGCTACAACCTCCCGATGATGGTGGACGCCAGCGGTGGCTCCGGCTTGTGCGCCACCACCGGCTGCGGGGCGGACCTGAACCGACGGTGCCCAGCGGAGCTGAGGGTGGAAGGCGGCGACGCGTGCCAGAGCGCCTGTCGCGCGTTCGGGAAACCGGAGTTCTGCTGCAGCGGCGCGTTTAGTTCACCGTCGGTGTGCGCGCCTTCGATGTACTCGGAGATTTTCAAGAACGCGTGCCCGAAATCTTATAGCTACGCGTTTGATGATGCTACCAGCACTTTCACGTGCACCGCTGCGGATTACACTGTCACATTTTGTCCCTCTTCTTCTCCAAGTTTGAAGTCTTTGATGGAATCTGGGCCAGGATCATCAGTAGAACAGGCAGCAGTAGCAACTAGTTCATGGATAGCCAATTTGGCCACAGGAGATTCAACCAGAAGACAACCAGTTTCATCTTCCAACTCTGCATTTTTTGTTTCTGTCACTTTCATTCTTTCCTATTTAGTCTCATAG 927 0.5642 MSPFSHSSHQSIVFLLILAFIGLRHAGMGVSATTFTFVNKCDHTVWPGILGKPDLGTSGFELKRGSTRTFDAPPGWSGRFWGRTGCQFDDSGHGTCATGDCGSGEVLCNGNGATPPATLAEFTLGSGSPDYYDVSLVDGYNLPMMVDASGGSGLCATTGCGADLNRRCPAELRVEGGDACQSACRAFGKPEFCCSGAFSSPSVCAPSMYSEIFKNACPKSYSYAFDDATSTFTCTAADYTVTFCPSSSPSLKSLMESGPGSSVEQAAVATSSWIANLATGDSTRRQPVSSSNSAFFVSVTFILSYLVS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2711 308 SUPERFAMILY Osmotin, thaumatin-like protein 33 246 IPR037176 -
Pvu3g2711 308 SMART tha2 35 245 IPR001938 -
Pvu3g2711 308 CDD TLP-PA 34 244 - -
Pvu3g2711 308 ProSitePatterns Thaumatin family signature. 92 108 IPR017949 -
Pvu3g2711 308 ProSiteProfiles Thaumatin family profile. 32 245 IPR001938 -
Pvu3g2711 308 Gene3D Thaumatin 33 245 IPR037176 -
Pvu3g2711 308 PIRSF PR5 1 298 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 34 46 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 58 67 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 79 90 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 92 121 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Pvu3g2711 308 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Pvu3g2711 308 PANTHER OS03G0233200 PROTEIN 22 269 IPR001938 -
Pvu3g2711 308 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 22 269 - -
Pvu3g2711 308 Pfam Thaumatin family 39 245 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2711 Pvu-Chr3 49099152 49100572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2711 14 282 Receptor kinase-like Gene Family AT5G38280 44.523 2.48e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2711 - - gmx:100778987 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2711 3 49099152 49100572 Pvu3g2711 3 49099152 49100572 ECH
Pvu3g2711 3 49099152 49100572 Pvu2g1113 2 21799500 21801247 ECH
Pvu11g0350 11 2973199 2975463 Pvu3g2711 3 49099152 49100572 ECH
Pvu2g1114 2 21830895 21833219 Pvu3g2711 3 49099152 49100572 PCT