Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0350 ATGGGTCGCCGGCTTCTCTTTCTCATCTTTCTCACCCTTGTCGCATTAGCTTTCCTCTCAGAGGTTCAATCAGCATCGTTCAGGATTGTGAACAAGTGTCGCCACACGATATGGCCGGGATTACTCTCCGGCGCCACCTCGCCGCCGCTTCCCACCACCGGATTCGCTCTCCAGAGCGGAGAATCGAAGACATTAAAAATCCCGAAATCTTGGTCGGGTCGGATATGGGCACGGACCCTCTGCGGTCGAGACCCGGACGGGAAGTTCTCTTGCGCCACCGCGGACTGCGGCTCCGAAAAGGTAGAGTGCGTCGGCGGTGCCAAGCCTCCGGCGACATTGGCAGAGTTCACCCTTAACGGCGCCGACGGGTTGGACTTCTACGACGTGAGTCTGGTCGACGGTTACAACCTCCCGATGCTGATCGTGGCGAAGGACGGCACCAGGGGCGGGTGCAGCGCCACGGGATGTCTCGTCGACCTCAACGGCGGGTGTCTGGCGGAGCTGAGGGTGACGCGCGTGAACACCAGCCGCAGGAGCCTGGCGTGCCGGAGCGCGTGCGAGGCCTTCGGTGATCCTCGTTTTTGCTGCAGCGGCGCGTACTCGACGCCTGACACGTGTGGTCCTTCTCCCTATTCGCTTTTCTTCAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAGACCAGCACCTACACATGTGCCTCCGCCAACTATTTGATCATTTTCTGCCCCTTACCCTATTCCAGCCAAAAGCTTCTGGGAGCACGTAAAGATGGGGCAACTCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCTACAGTCCAGTGGTTCTTCACCATCATTTGTGGTTCAAACGCAGAGTGTAGCTTATGTTGCCTCTCTTTTAGTGGCTCTGTTGCTGTTCTTCCCTCTCTAG 933 0.5702 MGRRLLFLIFLTLVALAFLSEVQSASFRIVNKCRHTIWPGLLSGATSPPLPTTGFALQSGESKTLKIPKSWSGRIWARTLCGRDPDGKFSCATADCGSEKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCLAELRVTRVNTSRRSLACRSACEAFGDPRFCCSGAYSTPDTCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYSSQKLLGARKDGATLPLVNKTMMYLSRLQSSGSSPSFVVQTQSVAYVASLLVALLLFFPL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0350 310 PIRSF PR5 1 300 IPR001938 -
Pvu11g0350 310 CDD TLP-PA 26 246 - -
Pvu11g0350 310 SMART tha2 27 247 IPR001938 -
Pvu11g0350 310 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Pvu11g0350 310 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 258 - -
Pvu11g0350 310 PANTHER OS03G0233200 PROTEIN 6 258 IPR001938 -
Pvu11g0350 310 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Pvu11g0350 310 Gene3D Thaumatin 25 247 IPR037176 -
Pvu11g0350 310 Pfam Thaumatin family 31 247 IPR001938 -
Pvu11g0350 310 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Pvu11g0350 310 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Pvu11g0350 310 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Pvu11g0350 310 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Pvu11g0350 310 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0350 Pvu-Chr11 2973199 2975463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0350 6 264 Receptor kinase-like Gene Family AT5G38280 49.618 1.85e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0350 - - gmx:100802252 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0350 11 2973199 2975463 Pvu11g0350 11 2973199 2975463 ECH
Pvu11g0350 11 2973199 2975463 Pvu2g1114 2 21830895 21833219 ECH
Pvu11g0350 11 2973199 2975463 Pvu3g2711 3 49099152 49100572 ECH
Pvu11g0350 11 2973199 2975463 Pvu2g1113 2 21799500 21801247 ECH