Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0351 ATGGATCTCATACCACTCTCATGCCTCACTCTCATTGCTCTCCTCTTCACTCCCTCAGGGGTTATGGGTGCCACCTTCACATTTGTTAACCGATGTGATTACACAGTGTGGCCAGGCATTCTCGCAAATGCGGGTAGCCCACCACTCCAAAGCACCGGCTTCGAGCTTCCCAAGGACACTTCTCGCGCCTTTCAAGCCTCCACCGGCTGGTCCGGTCGTTTCTGGGCCCGAACCGGTTGCACCTTCGACGGATCCGGATCCGGCTCCTGCCTCACCGGAGACTGCGGCTCCGGCCAAGTCGAATGCAACGGCGCCGGAGCCGCCCCGCCGGCCACTCTCGCCGAGTTCACGCTGGGCACCGGAGGCCAGGACTTCTATGACGTCAGCCTCGTCGACGGCTACAACCTTCCCATGATCGTGGAGGGTACTGGCGGGTCAGGCCTATGCGCCTCCACTGGCTGCACGTCGGATCTGAACCAGCAATGCCCGGCGGAGCTGAGAGCTTCCGAGGGAAGCGCGTGCAAGAGCGCGTGCGAGGCTTTTGGTAGTCCCGAGTACTGCTGCAGCGGCGCGTACGGCTCACCCGCCACCTGTAGGCCCTCCATTTACTCGGAGATGTTCAAGGCTGCTTGCCCCAGATCGTATAGCTACGCGTACGATGATGCTACCAGTACGTTCACGTGTAGCGGCGCTGATTATACCGTTACCTTCTGTCCATCCTCTCCAAG 728 0.6058 MDLIPLSCLTLIALLFTPSGVMGATFTFVNRCDYTVWPGILANAGSPPLQSTGFELPKDTSRAFQASTGWSGRFWARTGCTFDGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTCSGADYTVTFCPSSP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0351 242 SUPERFAMILY Osmotin, thaumatin-like protein 24 240 IPR037176 -
Pvu11g0351 242 CDD TLP-PA 25 238 - -
Pvu11g0351 242 Pfam Thaumatin family 30 239 IPR001938 -
Pvu11g0351 242 Gene3D Thaumatin 24 239 IPR037176 -
Pvu11g0351 242 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 13 241 - -
Pvu11g0351 242 SMART tha2 26 239 IPR001938 -
Pvu11g0351 242 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Pvu11g0351 242 PIRSF PR5 2 242 IPR001938 -
Pvu11g0351 242 ProSiteProfiles Thaumatin family profile. 23 239 IPR001938 -
Pvu11g0351 242 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Pvu11g0351 242 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Pvu11g0351 242 PRINTS Pathogenesis-related protein signature 86 115 IPR001938 -
Pvu11g0351 242 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Pvu11g0351 242 PRINTS Pathogenesis-related protein signature 229 238 IPR001938 -
Pvu11g0351 242 PANTHER OS03G0233200 PROTEIN 13 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0351 Pvu-Chr11 2979669 2980781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0351 6 240 Receptor kinase-like Gene Family AT5G38280 49.388 1.68e-79 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0351 - - gmx:100801173 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0351 11 2979669 2980781 Pvu11g0351 11 2979669 2980781 ECH
Pvu11g0351 11 2979669 2980781 Pvu2g1114 2 21830895 21833219 ECH