Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3741 ATGTCTTCTGCTGGTGTAACTACTCTTAGTCCTGTTTCGAGGGAGACATTGTTGTCTCCGACGAATGGATTTTGTAATCCACTGCACTTGTCTGTGGATCATCATGATTTCATTTTCGTGTATCTTTCGTATTCGGGGTCTTTGTCTCCTATGCGTGTTCTACCCTCTGATACAATTGAGTCTGTGAAACTCAAAATCCAAAGGAATGAGGGTGTGACAAACAAACAGAAGTTGGTTTGTAATGGCCGTGAGTTGTCGCGGAGCAATTCTCTGCTCAAAGACTATGGAGTTACGGAAGGAAATGTTTTGCATTTGGTGATTCGACTGACGGATCTTCAGACTATTAGTGTGAGAACTTGTTCTGGGAAGGAGTTTTTGTTTCAGGTTGAAAGATGCAAGGATGTTGGGTATGTTAAGCAACAGATTGCGGAAAGGGAAAATGAGTTTGCTGATCCTGAACAGCAGGAGGTTGTGTGTAACGGGGAACTGCTCGAGGATCAGAAGCTTATAGATGATATCTGTTGCAAATATAATGATGCAGTGATACATCTTTTTGTTAGAACAAAATATGCTGATGTTAGTACAGGACTTGATGAGTTGTCCATTGAAGCAAAGGAATTGAATGATGCTAATGAAAGTGACTATGGGAGAAAATATGAAGATGCCGCAAGGGAGTATGAAGCTATCAACCAGATTATGTCGAGGAAAGCTCTTGATAGAGGTCTTCTTTTGGAGCCGGTCATTGTTAACCCTAAAGTTGAATTAGCTTCAGAGGTTTGGGATATGATAAACTCTACATATGATGGGCTAGATAGCGGAAATTCTCCAATCAGATCGGCAGAGGGCACAGGTGGGGCGTACTTTATGCTAGATTCAACCGGGCAAAAATATATATCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGCTTACCTTTGTCATTAGATGGTGAAGGCTTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGACCATCCAATCACTGGCTGCCGATCATTATTTGGCGATGGGAAGGGGTTTGCCGGTGTTCCGCCGACTGTTATGGCGAAGTCCTTGCATAAAGGGTATAACCATCCAGAGGGTTTGACTGCTAAGTTTGGTTCCTTGCAAATGTTCATGGAGAATAATGGAAGTTGTGAGGATATGGGACCTGGTGCTTTTCCTGTCAAGGAAGTGCATAAAATTACGGTGCTGGACATAAGACTTGCTAATGCAGACAGGCATGCTGGGAATATTTTGATTGGCAGAGAGAAGGAAAATAACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCCTCCCTACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGGCGTACTCTCAAGAGATCATCGACTACATAAAGTCCCTGGACGCTGAAGAAGATATTGCCCTTCTGAAGTTTCACGGATGGGATCTGCCACACGAATGCGCCCGCACTCTCCGAATCTCGACCATGCTTCTGAAAAAAGGAGTGGAAAAAGGGATGACCCCTTTCGCAATTGGAAGCCTAATGTGCCGAGAATCCTTGAACAACGAGTCTGTGATTGAAGGAATTGTTAAAACAGCACTTGAATCTGTTCTTCCTGGTACCAGTGAAGCTACTTTCATGGAAGCAGTGTCTGAAATTATAGACCAACACCTTGATGAAGTCAGCAGCAATTATAAATCTTAA 1767 0.429 MSSAGVTTLSPVSRETLLSPTNGFCNPLHLSVDHHDFIFVYLSYSGSLSPMRVLPSDTIESVKLKIQRNEGVTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLTDLQTISVRTCSGKEFLFQVERCKDVGYVKQQIAERENEFADPEQQEVVCNGELLEDQKLIDDICCKYNDAVIHLFVRTKYADVSTGLDELSIEAKELNDANESDYGRKYEDAAREYEAINQIMSRKALDRGLLLEPVIVNPKVELASEVWDMINSTYDGLDSGNSPIRSAEGTGGAYFMLDSTGQKYISVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPITGCRSLFGDGKGFAGVPPTVMAKSLHKGYNHPEGLTAKFGSLQMFMENNGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILIGREKENNQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQAYSQEIIDYIKSLDAEEDIALLKFHGWDLPHECARTLRISTMLLKKGVEKGMTPFAIGSLMCRESLNNESVIEGIVKTALESVLPGTSEATFMEAVSEIIDQHLDEVSSNYKS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3741 588 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 586 IPR044571 -
Psa4g3741 588 SUPERFAMILY Ubiquitin-like 26 109 IPR029071 -
Psa4g3741 588 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 586 - -
Psa4g3741 588 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 273 566 IPR000403 -
Psa4g3741 588 PRINTS Ubiquitin signature 47 67 IPR019956 -
Psa4g3741 588 PRINTS Ubiquitin signature 89 110 IPR019956 -
Psa4g3741 588 ProSiteProfiles Ubiquitin domain profile. 28 108 IPR000626 GO:0005515
Psa4g3741 588 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
Psa4g3741 588 Pfam Ubiquitin family 44 109 IPR000626 GO:0005515
Psa4g3741 588 Gene3D - 114 195 - -
Psa4g3741 588 SMART ubq_7 38 108 IPR000626 GO:0005515
Psa4g3741 588 SMART ubq_7 113 187 IPR000626 GO:0005515
Psa4g3741 588 SUPERFAMILY Protein kinase-like (PK-like) 422 583 IPR011009 -
Psa4g3741 588 CDD Ubl_ubiquitin_like 115 185 - -
Psa4g3741 588 SUPERFAMILY Ubiquitin-like 111 188 IPR029071 -
Psa4g3741 588 Pfam Phosphatidylinositol 3- and 4-kinase 282 531 IPR000403 -
Psa4g3741 588 Gene3D - 37 113 - -
Psa4g3741 588 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3741 Psa-Chr4 315062819 315066026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3741 1 585 Acyl Lipid Metabolism Gene Families AT5G24240 55.034 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3741 - - gmx:100815111 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3741 4 315062819 315066026 Psa5g1839 5 141167637 141171111 ECH
Psa4g3741 4 315062819 315066026 Psa4g3741 4 315062819 315066026 ECH
Psa4g3741 4 315062819 315066026 Psa3g0059 3 8720807 8724128 ECH
Psa2g4242 2 424036733 424040411 Psa4g3741 4 315062819 315066026 ECH
Psa7g0558 7 37537823 37541054 Psa4g3741 4 315062819 315066026 ECH
Psa3g0059 3 8720807 8724128 Psa4g3741 4 315062819 315066026 PCT