Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0558 ATGTCGGTTGTTTTGAGTTCAATTTCGAAAGAGAGGGTGTATTGGGAGGGTCAACCAGAACATTGTTCTGTTGATCCAATCCTGATTTACCTTACTGTTGACAGTGTTGTTACCCCAATGCGGGTTTTGGAGTCGGATTCAATTGCCTCGGTGAAATTGAGGATTCAGCAGTGTAAAGGTTTTGTGGTGAAGAAACAGAAGCTTGTTTTTGGTGGCAGAGAGCTTGCTCGGAACGATACGCTTATTAAGGAGTATGGTGTTGCTGAAGGCAATGTTCTTCATTTGGTTTTACGCCTTTCGGATCTTCTTTTCATTGTTGTTAGGACAGTTTCTGGCAAGGAGTTTGAGTTTCATGTTGATAGGCATAGGAATGTGGGGTATCTTAAACAAAGGATTAGGAAAAAAGGGGAAGGTTTTATTGATCTTGAGGAACAAGAGCTTTTCTGTAATGAAGAGAAGCTTGATGATCAGATACTATTTCATGATATATGTAAAGGGGGTGACGGTGTAGTTCATTTGATTATTAAGAAATCGGTTAAGGTTAGGGCTACGCCTATTCTTAATGATTTGAATCTTTCTCTTGAGGCTTTGATACCGCGTGAGAGAAGTGATCAAAGAGAGTTACAGTTACAAGTAGAAGAGAATAAGAATAGGAGCAAACCGATTCAGATAGCAAAGTTACCGCCCGGTGTTGGTTTCTGGTTGGAACCTATTGCTGTGAATCCCAAGATCAGTTTTTTGCCTCTCCTTTGGGACATGATTAACTCCACATACGAGGGTTTGAAGAAAGGAAATCGTCCTATTAGGTCCTCGGAAGGAACAGGAGGGACTTATTTTATGCAAAATTCCACTGGCCAGGAGCGTGTTTCAGTTTTCAAGCCCTTGGATGAGGAACCAATGGCTGCGAACAACCCAAGAGGCTTACCATGTTCATTGAACGGCGAAGGTTTAAAAAGAGGAACAAGGGTGGGAGAAGGAGCTTTAAGGGAGGTTGCAGCTTATGTGTTGGATCATCCAAGGAGCGGACCACGTTTGGTGTCTGGTGAAGAAATCGGGTTTTCCGGTGTTCCTCCTACTGTTATGGTGCAGTGCTTACACCAAGAATTTCACCACCCAAATGGGTACGCATGCTCATCAAAACACATCAAGATTGGATCGTTACAGAAATTTATGAGTAATGACGGAAACTGTGAGGACATTGGACCCGGGGCCTTTCCCGTGGAGGAAGTGCATAAGATATCTGTGCTTGATATAAGAATGGCTAATGCAGACAGACATGCTGGGAATATTTTGTTCAGAAAGGAGGCATCTGGCCAGATTAAGCTCATTCCCATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGACTGCACATTTGATTGGCTTTACTGGCCGCAAGCACTCCAGCCTTACTCACCTGAGACAGTTGAGTATATCAATTCTTTGGATGCCGAAAAAGACATTGAAATTTTGAAATATTATGGATGGGATATTCCAATTGAGTGCGCGCGAACACTTCGCATTTCCACAATGCTGCTCAAGAAAGGGGTTGAGAGAGGTTTTACTCCCTATGCAATTGGAAGCATCATGTGTCGGGAAAATTTGAACAAGGAATCTGTAATTGAGGAAATTATAAGCGAAGCACAAGATTCCTTGCTTCCTGGCACGGAGGAATCAGCACTTCTTGAATCCGTCTCGCAAATCATGGATTCCCGTCTCGATAAGCTTGCACAATAG 1740 0.4282 MSVVLSSISKERVYWEGQPEHCSVDPILIYLTVDSVVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARNDTLIKEYGVAEGNVLHLVLRLSDLLFIVVRTVSGKEFEFHVDRHRNVGYLKQRIRKKGEGFIDLEEQELFCNEEKLDDQILFHDICKGGDGVVHLIIKKSVKVRATPILNDLNLSLEALIPRERSDQRELQLQVEENKNRSKPIQIAKLPPGVGFWLEPIAVNPKISFLPLLWDMINSTYEGLKKGNRPIRSSEGTGGTYFMQNSTGQERVSVFKPLDEEPMAANNPRGLPCSLNGEGLKRGTRVGEGALREVAAYVLDHPRSGPRLVSGEEIGFSGVPPTVMVQCLHQEFHHPNGYACSSKHIKIGSLQKFMSNDGNCEDIGPGAFPVEEVHKISVLDIRMANADRHAGNILFRKEASGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQALQPYSPETVEYINSLDAEKDIEILKYYGWDIPIECARTLRISTMLLKKGVERGFTPYAIGSIMCRENLNKESVIEEIISEAQDSLLPGTEESALLESVSQIMDSRLDKLAQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0558 579 Pfam Ubiquitin family 35 99 IPR000626 GO:0005515
Psa7g0558 579 SUPERFAMILY Ubiquitin-like 37 100 IPR029071 -
Psa7g0558 579 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 578 - -
Psa7g0558 579 SMART ubq_7 103 176 IPR000626 GO:0005515
Psa7g0558 579 SMART ubq_7 27 98 IPR000626 GO:0005515
Psa7g0558 579 ProSiteProfiles Ubiquitin domain profile. 103 177 IPR000626 GO:0005515
Psa7g0558 579 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 264 561 IPR000403 -
Psa7g0558 579 Gene3D - 104 187 - -
Psa7g0558 579 Pfam Phosphatidylinositol 3- and 4-kinase 273 526 IPR000403 -
Psa7g0558 579 Gene3D - 30 100 - -
Psa7g0558 579 SUPERFAMILY Ubiquitin-like 98 177 IPR029071 -
Psa7g0558 579 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 578 IPR044571 -
Psa7g0558 579 SUPERFAMILY Protein kinase-like (PK-like) 415 577 IPR011009 -
Psa7g0558 579 CDD Ubl_ubiquitin_like 105 174 - -
Psa7g0558 579 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0558 Psa-Chr7 37537823 37541054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0558 25 578 Acyl Lipid Metabolism Gene Families AT5G24240 58.378 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0558 - - gmx:100809172 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0558 7 37537823 37541054 Psa7g0558 7 37537823 37541054 ECH
Psa7g0558 7 37537823 37541054 Psa4g3741 4 315062819 315066026 ECH
Psa7g0558 7 37537823 37541054 Psa3g0059 3 8720807 8724128 ECH
Psa2g4242 2 424036733 424040411 Psa7g0558 7 37537823 37541054 PCT