Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0042 ATGCTGCTTTATGCCGTAGATGAACTCATTATCGCTGTAAGTTTACCATTTACATCTCAATCGTACCAGAACAGGAAAACAATGGCTGATAACAAAGGGCCACAACTTGTGCGTAAGCCTATTATCCGGATGAACCGCTTACAGCTAGCTCACGCCCATGCTCTGCCACAGAATTTCTCTCTTTATCTAAAATTAAGCAAGAAGCATGTGCTCGTTCATAATGCAGAGCGTATGGAGATGACGATGGTGTGTTTCTGTTCTTTGACAAAACAGTCTCATGCATTCCGCAAAAACGGCACTCTTATCTCAGCAATCCACTGTCCACTACGCAACAATACCACCAGTTGCCTGCAGAAAATTGCAGCAGACAAGGAGAATCAAACTAACACAACAACTCCCAAGACCAAACCTTCACTGTCATTTCATGCATTTGTAGCAAAGAAAAAGATGGAACCCACCTCCACAATACCCTCTTCCCATCAGCCAGTTAGGTCTATTAGTTTGCCCACCAGAATACATCCATCATCCCAGAGAGTTCAGGCACTTTTGAACCACTTAAAGCAGAGTGATGAGAGATCTATTCCAAGCAATTCGGAAGGAGGGACGATTCAGAATGATCTAGTAGTTCTTTCAGAATTGTACAATTGCATGGAGGAACTCCTCCAATCTTCCCAGACCCAACGTGCTATTCTGAAATACCAGCAAGGGAAAATGGTAGAAGAGCCACTGTGTGGGTCAGTCACGTTGTTAGATGCATGTGGGGCTGCAAGGGATTTATCATTGGCTCTCAGGGAACATTTACAGACACTTCACTCTGCTCTAAGAAGAAGACGGGGAGATTCGACCGTTGAAAGCAGCATATCTGCTTATGTGAGCTTCAGGAAGAAGGCCAAGAAGGAGATTGTCAAACAACTCGGAGCATTGAATCGAATGGTGATCAAAGTCAGCCCCTTTCCTGAGATGGGTCAAGACCAGAACCTGATATTTCTGGCTCGAGTTCTAAAAGAAGCAGGCACCATCACTGTTTCTGTATTACGTTCTCTTCTCGTGTTCTTGTCGACACCGAGGCTAAAAACGAAAGAGTCGTCCTTGATCTCCAAGTTAAAGCCCACCAGACTATTTTCATCGGAGAAGGAGCAGAGGAATACGAATGAAGTTGCCCTGCGTTCGCTGGTTGGAAAAGGAAGAAACAAAGAAGCACAAAGGGTTTTGGAGGAATTGATTGATGGCATGAGTGGTATTGAGGGAGGATTAGATTGCATATATAGGTGTCTAGTAAAACACAGAGTGTGTTTCCTGAATATGCTATCTCATTGA 1317 0.4412 MLLYAVDELIIAVSLPFTSQSYQNRKTMADNKGPQLVRKPIIRMNRLQLAHAHALPQNFSLYLKLSKKHVLVHNAERMEMTMVCFCSLTKQSHAFRKNGTLISAIHCPLRNNTTSCLQKIAADKENQTNTTTPKTKPSLSFHAFVAKKKMEPTSTIPSSHQPVRSISLPTRIHPSSQRVQALLNHLKQSDERSIPSNSEGGTIQNDLVVLSELYNCMEELLQSSQTQRAILKYQQGKMVEEPLCGSVTLLDACGAARDLSLALREHLQTLHSALRRRRGDSTVESSISAYVSFRKKAKKEIVKQLGALNRMVIKVSPFPEMGQDQNLIFLARVLKEAGTITVSVLRSLLVFLSTPRLKTKESSLISKLKPTRLFSSEKEQRNTNEVALRSLVGKGRNKEAQRVLEELIDGMSGIEGGLDCIYRCLVKHRVCFLNMLSH 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0042 438 PANTHER OS06G0725500 PROTEIN 159 436 - -
Lele50g0042 438 Pfam Protein BPS1 207 435 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0042 Lele-ChrLele50 292586 295039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0042 50 292586 295039 Lele56g0218 56 1776795 1777670 CCT
Lele50g0042 50 292586 295039 Lele51g0039 51 258200 259075 hybridization
Lele50g0042 50 292586 295039 Lele52g0043 52 284554 285423 hybridization