Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0227 ATGAATCTTGGGGCAGGGCTTACAGCTAGCTTATTGACAACAGATCGGATCAGGAAACCAATTAAAACGAAAATGGTCCATCTCCGTCCCTTGTTTGCAGGGGCAGTTCTCGCCATCTTGTCAGCCACCACGGCGGCGGAGCTGGCGTTACCCAATGCGGCGAGGCAGTTCTTAGACGCTCACAACCAGGCAAGAGCTGCTGTGGGGGTTCCCCCTCTTCAATGGAGCCAGGAGCTGGCCAATGCCAGTACCCAGCTAGTTCGCTCTCAAACAAACAAAAACGAGTGCGAATTCGCCACCATAAAGCCAGGAACTTACGGTGCCAACCTGCTGTTTTTTGACGGGGAGATCACGCCGCGAGAGGCGGTGGAGGAGTGGGTGGAAGAGAAGAATCGTTACAACCACGCCAACAACTCTTGCGCGCCCAATCGCGTGTGTGGGGATTACACTCAGGTGGTCTGGAGGAAGTCGTTGGAGCTGGGCTGTGCTAGAGGCACTTGTGTGGAGGCGGAGGACAGCTTAACCATTTGTTTGTATAATCCTCCCGGCAACATCGACGGCGAGAGCCCCTACTAG 576 0.5503 MNLGAGLTASLLTTDRIRKPIKTKMVHLRPLFAGAVLAILSATTAAELALPNAARQFLDAHNQARAAVGVPPLQWSQELANASTQLVRSQTNKNECEFATIKPGTYGANLLFFDGEITPREAVEEWVEEKNRYNHANNSCAPNRVCGDYTQVVWRKSLELGCARGTCVEAEDSLTICLYNPPGNIDGESPY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0227 191 SUPERFAMILY PR-1-like 51 191 IPR035940 -
Lele51g0227 191 Pfam Cysteine-rich secretory protein family 58 169 IPR014044 -
Lele51g0227 191 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 56 188 IPR001283 -
Lele51g0227 191 PRINTS Allergen V5/Tpx-1 family signature 73 91 IPR001283 -
Lele51g0227 191 PRINTS Allergen V5/Tpx-1 family signature 122 135 IPR001283 -
Lele51g0227 191 PRINTS Allergen V5/Tpx-1 family signature 146 162 IPR001283 -
Lele51g0227 191 PRINTS Allergen V5/Tpx-1 family signature 174 187 IPR001283 -
Lele51g0227 191 CDD CAP_PR-1 54 191 - -
Lele51g0227 191 SMART SCP_3 52 187 IPR014044 -
Lele51g0227 191 Gene3D CAP 52 191 IPR035940 -
Lele51g0227 191 FunFam CAP, cysteine-rich secretory protein, antigen 5 51 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0227 Lele-ChrLele51 1282756 1283331 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0227 51 1282756 1283331 Lele53g0087 53 665406 666127 CCT
Lele51g0227 51 1282756 1283331 Lele54g0089 54 742099 743868 CCT
Lele51g0227 51 1282756 1283331 Lele55g1409 55 20392251 20397422 CCT
Lele51g0227 51 1282756 1283331 Lele56g1343 56 16625373 16628101 CCT
Lele49g0212 49 1265978 1268875 Lele51g0227 51 1282756 1283331 hybridization