Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0087 ATGCAGTATCCTGAAACAGCTTCATCAAGCATGATCAGGCTGGCAGAACATCTTGGGACTCGGGCTTGCAAAGCCACCTATGGCATATCATCGCCAAGTTCATCTTTTTCATCCATGAGTTCTTTCTCCATTGGAGAACAAGGTAATATGTGGAGTCCAAGGTTCAGGAATAATTCCTTCTTCTATGTGGGCTTGGAGAATCCTTTCCAAGTGGAAGGACGTCACCACGTTGGGGTTGGGACCTACTGCTCCTGTTCGAAGTCTCATGGATTTACAGACAGTCTAAAATTGGGTTATACAGAGAATTTGCTCCAGAATTTCAGGTCTCTTACTCGTCGACTGGAAGAAGTAGATCCTGGGAAATGGGATCATGAGGAGAAGCTGGCCTCTTGGATCAATGCACACAACTCTTTGGTGATGCATGCATTTTTGGCTCATGGGATTCCACAGAACAATGTGAAAAGAGTCTTCTTCTTTTGA 480 0.4479 MQYPETASSSMIRLAEHLGTRACKATYGISSPSSSFSSMSSFSIGEQGNMWSPRFRNNSFFYVGLENPFQVEGRHHVGVGTYCSCSKSHGFTDSLKLGYTENLLQNFRSLTRRLEEVDPGKWDHEEKLASWINAHNSLVMHAFLAHGIPQNNVKRVFFF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0087 159 Pfam Protein of unknown function, DUF547 121 159 IPR006869 -
Lele53g0087 159 PANTHER UNCHARACTERIZED 4 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0087 Lele-ChrLele53 665406 666127 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0227 51 1282756 1283331 Lele53g0087 53 665406 666127 CCT
Lele49g0211 49 1258531 1265254 Lele53g0087 53 665406 666127 CCT
Lele53g0087 53 665406 666127 Lele55g1409 55 20392251 20397422 hybridization
Lele53g0087 53 665406 666127 Lele56g1343 56 16625373 16628101 hybridization