Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0212 ATGAATCTTGGTGCATGGCTTACAGCTAGCTTATTGACAACAGATCGGGTCAGGAAACCAATTAAAACGAAAATGGTCCATCTCCGTCCCTTGTTTGCAGTGGCAGTTCTCGCCATCTTAGTAGCTGCTGTGTGTATCACGCCGCGAGAGGCGGTGGAGGAGTGGCTGGAAGAGAAGAATCGTTACAACCACGCCAACAACTCTTGCGCGCCCAATCGCGTGTGTGGGGATTACACTCAGGTGGTCTGGAGGAAGTCGTTGGAGCTGGGCTGTGCTCGAGGCACTTGTGTGGAGGCGGAGGACAGCTTAACCATTTGGCTTACAGCTAGCTTATTGCCAACAGATCGGATCACGAAACCATTGAGAACGAAAATGGTCCATCTCCGTCCCTTGTTTGCAGTGGCAGTTCTCGCCATCTTGTCAGCCACCGCGGCGGCGGAGGTGGCGTTACCGGATGCGGCGAGGCAGTTCTTAGACGCTCACAACCAGGCAAGAGCTGCAGTGGGGGTTCCCCCTCTTCAATGGAGCCAGAAGCTGGCCAACGCCACCAGCCTGCTGGTCCGCTCCCAAAGAAACAGAAATGGGTGCCAATTCGCCACCATAAAACCAGGAACTTACGGTGCCAACCAGCTGTGGTCGGGAGGAGAGACGGTGACGCCGCAAGAGGCTGTGGAGGAGTGGGTGAAAGAGAAGAATTACTACAACCACGCCAACAACTCTTGCGTGCCCAATCACAGTTGTGGGGTTTATACTCAGGTGGTTTGGAGGAAGTCATTGGAGCTGGGCTGTGCTCAAGCCTCTTGTGTGAAGGAGAAGGCCAGCTTAACCATCTGTTTCTATAATCCCCCCGGAAACATTGTCGGCGAGAGCCCCTACTAG 879 0.5438 MNLGAWLTASLLTTDRVRKPIKTKMVHLRPLFAVAVLAILVAAVCITPREAVEEWLEEKNRYNHANNSCAPNRVCGDYTQVVWRKSLELGCARGTCVEAEDSLTIWLTASLLPTDRITKPLRTKMVHLRPLFAVAVLAILSATAAAEVALPDAARQFLDAHNQARAAVGVPPLQWSQKLANATSLLVRSQRNRNGCQFATIKPGTYGANQLWSGGETVTPQEAVEEWVKEKNYYNHANNSCVPNHSCGVYTQVVWRKSLELGCAQASCVKEKASLTICFYNPPGNIVGESPY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0212 292 CDD CAP_PR-1 154 292 - -
Lele49g0212 292 FunFam CAP, cysteine-rich secretory protein, antigen 5 152 292 - -
Lele49g0212 292 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 47 110 IPR001283 -
Lele49g0212 292 SUPERFAMILY PR-1-like 151 292 IPR035940 -
Lele49g0212 292 Gene3D CAP 152 292 IPR035940 -
Lele49g0212 292 Gene3D CAP 35 110 IPR035940 -
Lele49g0212 292 Pfam Cysteine-rich secretory protein family 158 271 IPR014044 -
Lele49g0212 292 Pfam Cysteine-rich secretory protein family 47 97 IPR014044 -
Lele49g0212 292 PRINTS Allergen V5/Tpx-1 family signature 275 288 IPR001283 -
Lele49g0212 292 PRINTS Allergen V5/Tpx-1 family signature 51 64 IPR001283 -
Lele49g0212 292 PRINTS Allergen V5/Tpx-1 family signature 75 91 IPR001283 -
Lele49g0212 292 SUPERFAMILY PR-1-like 46 99 IPR035940 -
Lele49g0212 292 SMART SCP_3 152 288 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0212 Lele-ChrLele49 1265978 1268875 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0212 49 1265978 1268875 Lele51g0227 51 1282756 1283331 hybridization