Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1343 ATGTGGAATAACAATCACGCTGAAGCCTCAGACCCAATGAAGCAGGATATGCGATACTTTATGGAGAGTTTTGAAGCTGGGAAGAAACAAACCCCGGCGAGTGAAGTTCAAAATAATCTGAGGCAAGAGATTTTACAGCTTGAGAGAAGATTACAAGACCAATCTGAGGTGAGATGTGGATTAGAAAGAGCACTTGGGTACAGACCTTCATCTTTTGTAGATTCAAACGACATCGTGCTGCCTGAGCCAGCAACAAAACTGATAAAAGAAATTGCAGTGTTGGAGTTGGAAGTTGTGTATTTAGAGCAGCACCTTCTATCTTTGTATCGAAAAGCGTTTCATCAACAATTATCTTCTGTATCCCCATCTGCAAAGGACGAAAGATTGAAACTTTCTCCAAGGACTACTCCTAGTTCATTTCTTGAATTTTCCAAGCCTTACAATTTCTCAAATGCAGCAAGAGATGAGTATAATAAAGGAAATGGATTAATAAAAGAAAAGCTATTTGATTCCAGCACGTATCGTTGCCATTCCTCATTATCTCACAGTTCTAACTTCACAACTAGAACATCTCCTGCAGAATCATTAGCTAAAGCTGTTTGTCATTCTCGACAATTGTCCATGATAGAGTATCCTGAAACAGCTTCATCAAGCATGATGAGTTTAGCAGAACATCTTGGGACTCGCGTGTTTGACCAAGTTCCAGATACACCTAATAGGATTTCTGAGAATATGGTGAAATGCATATCAGCAATATATTGCAGGATTGCAGAGCCACCTATGGCATATCACGGCCTATCATCGCCAAGTTCATCTTTTTCATCCATGAGTGCGTTTTCCATTGGAGAACAAGGCAATATTTGGAGTCCAGGGTTCAGGAATAATTCCTTCTTCGATGTGGGATTAGAGAATCCTTTCCAAGTGGAAGGACGTCACCACGTTGGGGTTGGGCCCTACTGCTCCATGTTCGAAGTCTCATGGATTTACAGAGACGGCCTAAAATTGGGCGATACAGAGAATTTGCTCCAGAATTTCAGGTCTCTCACTCGTCGTTTGGAAGAAGTAGATCCTGAGAAGTTGAATCATGAGGAGAAGCTGGCCTTTTGGATCAATGTACACAATGCTTTGGTGATGCATGCATATTTGGCTCATGGGATTCCACAAAACAATGTAAAAAGAGTATTTCTTCTTTTGAAGGCTTCATATAATGTTGGGGGACGCCCAGTATGCACTGATTCAATACAGAATACTATCCTAGGATGTCGGATGTCCCGACCCGGACAATGGGTTCGGTTGTTGTTATCTCCATGGACCAAGTTAAGGAGTGGAGAAAGAGGAGAAGCATACGCAATAGAGCGTGCAGAGCCACTTTTACACTTCGCACTCTGCTCAGGAAACCATTCTGATCCTGCTGTAAGAGTATATACGGCAAAGAGAGTGATGGAGGAGTTACAAGTAGCGAAAGAAGAGTACATAGGAGCAACGTTTGGGATAAGAAAGGAGCAAAAGATAATGTTACCGAAGGTGGTGGAGGCATTTGCAAAGGACTCAGGAATGAGCCGTGGTGGTGTGATAGAGATGCTGCAACAGTGTGTGCCTCAGTCCACAAGCTTGGTCAATCGTTGTCGTCACTCATCAGACACCATGCAATGGATTCCCCACAACTTCTCTTTCCGATATCTCATCTCTAACCACCTCCTCCTCTCTTGA 1710 0.4287 MWNNNHAEASDPMKQDMRYFMESFEAGKKQTPASEVQNNLRQEILQLERRLQDQSEVRCGLERALGYRPSSFVDSNDIVLPEPATKLIKEIAVLELEVVYLEQHLLSLYRKAFHQQLSSVSPSAKDERLKLSPRTTPSSFLEFSKPYNFSNAARDEYNKGNGLIKEKLFDSSTYRCHSSLSHSSNFTTRTSPAESLAKAVCHSRQLSMIEYPETASSSMMSLAEHLGTRVFDQVPDTPNRISENMVKCISAIYCRIAEPPMAYHGLSSPSSSFSSMSAFSIGEQGNIWSPGFRNNSFFDVGLENPFQVEGRHHVGVGPYCSMFEVSWIYRDGLKLGDTENLLQNFRSLTRRLEEVDPEKLNHEEKLAFWINVHNALVMHAYLAHGIPQNNVKRVFLLLKASYNVGGRPVCTDSIQNTILGCRMSRPGQWVRLLLSPWTKLRSGERGEAYAIERAEPLLHFALCSGNHSDPAVRVYTAKRVMEELQVAKEEYIGATFGIRKEQKIMLPKVVEAFAKDSGMSRGGVIEMLQQCVPQSTSLVNRCRHSSDTMQWIPHNFSFRYLISNHLLLS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1343 569 Pfam Leucine-zipper of ternary complex factor MIP1 34 115 IPR025757 -
Lele56g1343 569 Pfam Protein of unknown function, DUF547 358 492 IPR006869 -
Lele56g1343 569 PANTHER UNCHARACTERIZED 27 565 - -
Lele56g1343 569 Coils Coil 37 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1343 Lele-ChrLele56 16625373 16628101 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0227 51 1282756 1283331 Lele56g1343 56 16625373 16628101 CCT
Lele49g0211 49 1258531 1265254 Lele56g1343 56 16625373 16628101 CCT
Lele53g0087 53 665406 666127 Lele56g1343 56 16625373 16628101 hybridization
Lele54g0089 54 742099 743868 Lele56g1343 56 16625373 16628101 hybridization