Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1409 ATGAGATACGATTACTGTATGCAGGATATGCAATACTTTATGGAGAGTTTTGAACCTAGGAAGAAAGAAAGCCCGGCGAGTGACGTTCAAAATAATCTGAAGCAAGAGGAAGTTGTGTATTTAGAGCAACGCCTTCTATCTTTGTATCGAAAAGCGTTTCATCAACAATTATCTTCTGTATCTCCATCTGCAAAGGACGATAGATTGAAACTTTCTCTAAGGACTACTCCTAGTTCATTTCTTGAAGTCTCCAAGCCTTGCAATTTCTCAAATGCATCAGCAAGAGATGAGTATAATAGAAACGGATTAAAAGAAAAGCTATTTGATTCCAGCATGTATCGTTGCCATTCCTCCTTATCTCACAGTTCCAACTTCACAACAAGAACATCTCCTTCAGAATCATCAGCTAAAGCTGTATATGCCTGTCATTCTCGACAATTGTCCATGATGGAGTATCCTGAAACAGCTTCGTCAAGCATGATCAGGCTGGCAGAACATCTTGGGACTCGGGTGTTTGACAATGTTTCAGATACACCTAAAAGGATTTCTGAGAATATGGTGAAATGCATATCAGCAATATATTGCAGGCTTGCAGAGCCACCTATGGCATATCACGGCATATCATCGCCAAGTTCATCTTTTTCATCCATGAGGGCTTTTTACATTGGAGAACAGGGTAATATGTGGAGTCCAAGGTTCAGGAATAATTCCTTCTTCTATGTGGGCTTGGAGAATCCTTTCCAAGTGGAAGGACGTCACCACGTTGGGGTTGGGCCCTACTGCTCCATGTTCGAAGTCTCATGGATTTACAGACAGTCTAAAATTGGGTTATACAGAGAATTTGCTCCAGAATTTCAGGCATTTTTGGCTCATGGGATTCCACAAAACGATGTGAAAAGAGTCTTTCTTCTTTTGAAGGCTTCATATAATGTGGGGGGATGCCCAATTAGTGCTGAGACAATACAGAATAGTATCCTAGGATGTCGGATATCCCGACCCGGACAATGGCTTCGGTTGTTGTTATCTCCGTGGACCAAGTTAAGGAGCGGAGATAAACGAGAAGCATATGCAATGGAGCGTACAGAGCCTCTTTCACACTTCGCCCTCTGGACCTCACGGCCTGCTCTCTGGACCACTTATCAAATGACACCTGTGCTGGGTACGTCAGCTAGGCCACCTAAGTCGAGTTCACCGTGGAAGCCCCTTAACCTTATCCCAGGATCTCTCCATGAAATATTTTCCTTCGTATACACCGTGAATATTCTATCTATATTGCATACATTTACAACACTTCATCTAAATGCTTCAACAGTTCCATCTCAATACCTGGAGCTCTGTGTCATCATAACTTCACAGCTGTATAAAGCAGAGCATTAG 1377 0.4256 MRYDYCMQDMQYFMESFEPRKKESPASDVQNNLKQEEVVYLEQRLLSLYRKAFHQQLSSVSPSAKDDRLKLSLRTTPSSFLEVSKPCNFSNASARDEYNRNGLKEKLFDSSMYRCHSSLSHSSNFTTRTSPSESSAKAVYACHSRQLSMMEYPETASSSMIRLAEHLGTRVFDNVSDTPKRISENMVKCISAIYCRLAEPPMAYHGISSPSSSFSSMRAFYIGEQGNMWSPRFRNNSFFYVGLENPFQVEGRHHVGVGPYCSMFEVSWIYRQSKIGLYREFAPEFQAFLAHGIPQNDVKRVFLLLKASYNVGGCPISAETIQNSILGCRISRPGQWLRLLLSPWTKLRSGDKREAYAMERTEPLSHFALWTSRPALWTTYQMTPVLGTSARPPKSSSPWKPLNLIPGSLHEIFSFVYTVNILSILHTFTTLHLNASTVPSQYLELCVIITSQLYKAEH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1409 458 Pfam Protein of unknown function, DUF547 286 370 IPR006869 -
Lele55g1409 458 PANTHER UNCHARACTERIZED 35 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1409 Lele-ChrLele55 20392251 20397422 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0227 51 1282756 1283331 Lele55g1409 55 20392251 20397422 CCT
Lele49g0211 49 1258531 1265254 Lele55g1409 55 20392251 20397422 CCT
Lele53g0087 53 665406 666127 Lele55g1409 55 20392251 20397422 hybridization
Lele54g0089 54 742099 743868 Lele55g1409 55 20392251 20397422 hybridization