Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0490 ATGGAATTCTCAGAGCAGGACCTAGATATATTCGGCGAACATTACGATCAGGACCCCGACAAAGAGGCCCGTGACGACCAAGATGGGACTCACTCCTCTTCCCCATCTTCATCCTCCTCTGGCTCTTCTTCTTCATCCTCTTCATCATCTGCTTCTTCATCCAACGCCAGTGATGGCGATGATTCCTCCAGCGGTAGCGGAAGCTCCAGCAGTGCTGCCGATGAAGGCGAAGAGAATGGCGAGGAGGTTGAGCATAGCAGTAGGGTGTATTATGACGTCGATGAAAAAGACCTGTTTGGTTCTGATAATGAAGATTATTGTAAAACTCCTGCTCAAAGTCCTTACTCGATTCCAGTATTGCCCGCCGTCCGCAATACAAATAATCAGGGTAGGGGGGGTTTTGGCCGTGGTCGTTGGCAAAATGATAGAGGAGCAGGCCTTCTTCCTCGTCCTGGACCTTATCCTCAGAGGCAAAATTTTGGTTATGGAAACAGGTTTTCAAATGGCCGCCATGATGAAAGATTTGTCGCTGAGCTGAAGCTTTCCAAGAGTGAAGAGACTTTGTCAAGAAAGTGTATCGCTATTCAGGAGCCATGTGAAATTGCCTGCTATAGTCGTGTAGAAGGTGGAGAGGTCTACTTTGATGATCGCAGCTTGAGGCTTTTTAAACGCCTTATCACTGAAGATATTGGAGCTGATTTGAATGACGGTTATGATACATTTATTGCTAAAAAAGACTTAGGTTCAGAGGGCTTTGGTGATCTTCTTGCTTGCATTAGAGACAAAAATATTCCCCTCCAAAACATTCATTTTGTGACATTTCGTAACAATCTTAACAAGATAATGGCCACTGCTTATATCCGACATGAGCCTTGGGAAATGGGGGTACATAAAAGGAATGGGGTTGTTTATCTTGATGTGCATAAACTGCCAGAAAGATCACAGAGTGATTTGGATCGCCGGAGATGTTATTGGGGATATTGTTTTGAGAGCCTTGCCACTGAAGATCCTAGGTCTGATGGAGAGGGTATACATCATGTTGATGCCAATGTTGAATATTGTTCTGTGATCAAAACAAAATTAGGGGCTCACCGCATCTTGATGGGTGCTGAGATGGATTGCTGTGATTCAACTGATGATGGAAGGAGATTTTATGTTGAACTAAAGACAAGTCGTGAGTTGGACTATCATACTGAGGAAAAATATGAGAGAGAAAAACTGCTAAAGTTTTGGATTCAGTCATTTTTGGCGGGAGTTCCATACATTGTCATAGGATTTAGAGATGATGCAGGTCATCTTGTTCGGACAGAAAGACTAAGAACCAAAGAAATCACTCAGAGAATAAAAATGAAGAACTACTGGCAGGGAGGAGTCTGCTTGGCGTTTGCAGATGAAGTTTTATGCTGGCTTTATGGAACAGTCAAGGAGAATGAAGATTACGTATTGCAGTTCGCTCCACCTTTCACCCGTTTGGAGCTTCTACAGGGCCAGTCTTGTCCAGATGCAATTACCGGTCATCTTGAGATGTTGTGA 1533 0.439 MEFSEQDLDIFGEHYDQDPDKEARDDQDGTHSSSPSSSSSGSSSSSSSSSASSSNASDGDDSSSGSGSSSSAADEGEENGEEVEHSSRVYYDVDEKDLFGSDNEDYCKTPAQSPYSIPVLPAVRNTNNQGRGGFGRGRWQNDRGAGLLPRPGPYPQRQNFGYGNRFSNGRHDERFVAELKLSKSEETLSRKCIAIQEPCEIACYSRVEGGEVYFDDRSLRLFKRLITEDIGADLNDGYDTFIAKKDLGSEGFGDLLACIRDKNIPLQNIHFVTFRNNLNKIMATAYIRHEPWEMGVHKRNGVVYLDVHKLPERSQSDLDRRRCYWGYCFESLATEDPRSDGEGIHHVDANVEYCSVIKTKLGAHRILMGAEMDCCDSTDDGRRFYVELKTSRELDYHTEEKYEREKLLKFWIQSFLAGVPYIVIGFRDDAGHLVRTERLRTKEITQRIKMKNYWQGGVCLAFADEVLCWLYGTVKENEDYVLQFAPPFTRLELLQGQSCPDAITGHLEML 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0490 510 MobiDBLite consensus disorder prediction 30 74 - -
Lele50g0490 510 PANTHER DOM-3 RELATED 28 495 IPR039039 -
Lele50g0490 510 MobiDBLite consensus disorder prediction 7 29 - -
Lele50g0490 510 Pfam RAI1 like PD-(D/E)XK nuclease 372 434 IPR013961 -
Lele50g0490 510 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0490 Lele-ChrLele50 2892827 2897298 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0490 50 2892827 2897298 Lele53g0294 53 2470140 2472745 CCT
Lele50g0490 50 2892827 2897298 Lele54g0293 54 2489242 2491692 CCT
Lele50g0490 50 2892827 2897298 Lele55g1194 55 18548899 18551814 CCT
Lele50g0490 50 2892827 2897298 Lele56g1146 56 14918678 14921170 CCT
Lele50g0490 50 2892827 2897298 Lele50g0490 50 2892827 2897298 ECH
Lele50g0490 50 2892827 2897298 Lele52g0488 52 2964770 2969230 hybridization