Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0008 ATGGCATGGACGAGATGTTTTTCCATATTGTTCCTTACAGAACTGTTTCCTGAATTTGATTCCTCGCTTATGGGGGTTGAGCGATATCAGTTCTACATATTGCCTCCTGTTGAAGTCTCAACATCTAGCCCAGTCAGAGTTGCATATCAGAATGCAATTCAAGGGATTATGAATCAGGTTTTCTTCTATACTCTTGTACGGATGTGGAATAATAATATGGATGCTTCCACAGCATGTTCTCATCTGGCTGAGGAGCATGGTGGATCTGATACTATAAAGGCAAGAGGTCTAGCAAGTAATGCAGATTTACGCTTCCCCTCCCCGGGCCTTAAGATTTCTCAATCTGAAGATTGTGCTTGTCCTTCTACAGCTGAACAGTGTAGCAGATCTCAAAATATTAATGATGGGGATGGTCGTGTCTGGATGCATAATAACAAGCAGGGATTCCAGGACTGTGAATCATATGCACTTCTAGAGTTGTGGCTTGGTAGAAAAGTAGATGAATACTTGGACAATCATTTCGATTCACTTAAGTTGGACAATGAAAATTGTGTCTCCAAACCAGATTGCGAATGGGTACAGTGTGACAAGTGCAGAAAATGGAGAGTTTTGCCGCTTGATTTTGACACCACATTGTTACCGGCACAATGGTATATTCATAAAGATAAGATACATCTGTGCTGTTGGTCTTTGCCTTTTTACCTGCCTGTGATTAAATACGAGTATTCTTTAGTTATAGAGTTTAGAAAAACACTTTTTTTGGTTTACCATCCGTATCATAATATCAAGTTCTTGTTCTACCAGCATGACGAGGTGGATGCTATGAAGGCTACAGCAGATGAAGGGTGGATCGACTGTGGAGTTTTGAAACCGCCTGCTTTCAAAAGATTGAGAAAGAGACCTCCTAACGCTAAGCTCATGGCTGACAGGTTTTGTGAAAGCCTTTTCACTTTTGGGCTAATTAGCATGACTGTGGTGCCACTGCCAGATCGCAAACTTCATCATTAA 1008 0.4117 MAWTRCFSILFLTELFPEFDSSLMGVERYQFYILPPVEVSTSSPVRVAYQNAIQGIMNQVFFYTLVRMWNNNMDASTACSHLAEEHGGSDTIKARGLASNADLRFPSPGLKISQSEDCACPSTAEQCSRSQNINDGDGRVWMHNNKQGFQDCESYALLELWLGRKVDEYLDNHFDSLKLDNENCVSKPDCEWVQCDKCRKWRVLPLDFDTTLLPAQWYIHKDKIHLCCWSLPFYLPVIKYEYSLVIEFRKTLFLVYHPYHNIKFLFYQHDEVDAMKATADEGWIDCGVLKPPAFKRLRKRPPNAKLMADRFCESLFTFGLISMTVVPLPDRKLHH 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0008 335 ProSiteProfiles Zinc finger CW-type profile. 186 228 IPR011124 GO:0008270
Lele50g0008 335 Gene3D - 178 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0008 Lele-ChrLele50 81199 87791 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0008 50 81199 87791 Lele53g1201 53 20794461 20796898 CCT
Lele50g0008 50 81199 87791 Lele54g1171 54 17407548 17410022 CCT
Lele50g0008 50 81199 87791 Lele56g0272 56 2114817 2135165 CCT
Lele50g0008 50 81199 87791 Lele51g0007 51 44621 54108 hybridization
Lele50g0008 50 81199 87791 Lele52g0007 52 57016 64558 hybridization