Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0007 ATGTATCAGGATGGACATTTTTGTACATACGATAAAGTTGAAGAATCTAGCAAGGATGAACCTATGCTTTCAGTTATTGATGATGGCCAAGGTATGGAATACAAAGACATTTTGAAAATGGTTTCCTTTGGGCACAAGCAAAGTAATAGTGATGATCCAGATCGCATTGGCAGATTTGGTGTTGGATTCAAGGTAGTGGATTCTAAATTGTCCAACTCTTTTTTTTCCCAGACTGGAGCAATGAGGCTTGGCAATGATGCCTTTGTTCTAACCCAGACTGCTAGTTCCAGATGTATAGCTTTCCTTTCACAGTCTTTGAATGAAGGGAAAGAGAATGTTGAGATCCCCGTAGTTTGCTATCGCCGACATGGACGGTGCATGGAAGTGGATACAAGTGTTCAGTCTGAAGCTGCTGCAATGTGCAATTTGAAAGCCATTAAGAAATTTTCTCCATTTGATTAGTTAGAAGCTTACAAGAGAGTTGGTGGCATGATTCATAATGCAGATGTGGCCCTTGGAGTAATTGGCGTCATAGATGTGACTGATTTAATGAATGATGGGGATTGCGAATGGGCACAGTCTGACAAGCGCAGAAAATGGAGAGTTTTGCCGCTTGATTTTGACACCACATTGTTACCTGCACAATGGTTCTGTTATATGGAGCCCTTCAAAGGACTGTGCGCAGCTGCAGAACAAAAAATGGAGCACGGTGTTGTCAATGTTTCGACAAAGCGGTCCGAATATGATAGCATGTCGGAAGATTCTCATTGCAATGACGAGGTGGATGCTATGAAGGCTACAGATGAAAGGTGGATCGACTGTGGAGTTTTGAAACCGCCTGCTTTCAAAAGATTGAGAAAGGGACCTCCTAATGCTAAGGTAAAAAGAAAAAGAGTACTTGGAAAGCTTAAGCTGGTGGGATCACTTGATAAAAAAGAGTCTCTCTGCGCTACATCTTCTCTCGTAGCTTGTTTTGTTGCTGGTTCAGTCTGGGGCTCTGGGCTCCTCTCACAAGTGGCAGTCACAGAGTGGCTTAGGTTTCTTGGTTATTACAAGAACAAAAAAAAGTTCCAATCCTTGTGTATGAAGAAAATTAGCCAATACGTCAATATTCAGAATATCAGTCCTCACAATCGACAAATAATTCATAATGATTATACACAAAATAGAGGATTGATTGAAGAATCTTGGAAGGGATGA 1200 0.4133 MYQDGHFCTYDKVEESSKDEPMLSVIDDGQGMEYKDILKMVSFGHKQSNSDDPDRIGRFGVGFKVVDSKLSNSFFSQTGAMRLGNDAFVLTQTASSRCIAFLSQSLNEGKENVEIPVVCYRRHGRCMEVDTSVQSEAAAMCNLKAIKKFSPFDXLEAYKRVGGMIHNADVALGVIGVIDVTDLMNDGDCEWAQSDKRRKWRVLPLDFDTTLLPAQWFCYMEPFKGLCAAAEQKMEHGVVNVSTKRSEYDSMSEDSHCNDEVDAMKATDERWIDCGVLKPPAFKRLRKGPPNAKVKRKRVLGKLKLVGSLDKKESLCATSSLVACFVAGSVWGSGLLSQVAVTEWLRFLGYYKNKKKFQSLCMKKISQYVNIQNISPHNRQIIHNDYTQNRGLIEESWKG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0007 399 ProSiteProfiles Zinc finger CW-type profile. 185 235 IPR011124 GO:0008270
Lele52g0007 399 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 17 67 IPR036890 -
Lele52g0007 399 Gene3D - 184 236 - -
Lele52g0007 399 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 17 65 - -
Lele52g0007 399 Gene3D - 8 130 IPR036890 -
Lele52g0007 399 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 11 153 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0007 Lele-ChrLele52 57016 64558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0008 50 81199 87791 Lele52g0007 52 57016 64558 hybridization