Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1201 ATGAGCCCGTGCCCTAGCGCCTGGAAGAAACTCTTCACAAAAGCTTGTAGCCTTGTGGGTCTCGGCCTTGCAACCTCCTTTTCTTCAGCTTCTTCGTCATCGAAGCTTGCCGCCATGGATGATCTCAAGATTCTCAAAACCAAGCTCTGCATAATCGGAAGTGGTCCTGCTGCGCATACAGCTGCCATTTACGCTGCTCGTGCCGAGTTAAAGCCCATCCTCTTCGAAGGTTGGATGGCCAACGACATTGCCCCTGGCGGTCAACTCACTACAACCACCGACGTTGAGAATTTCCCCGGATTTCCTGAAGGTATCATGGGCGGCGAGCTCATGGATCGTTGCCGGAAACAATCAGAGCGATTTGGCACCGAGATCTTCACCGAGACTGTCTCCAAGGTAGATTTTTCACGCAGACCATTTAAGGTTTTCACCGATTCCAAAACCTTGGAAGCCGAATCGGTTATCGTGGCCACTGGAGCCGTCGCCAAGCGATTGCCGTTTCCTGGCTCCGGCGATGGTCCCAAGGGGTACTGGAATCGGGGCATTTCGGCTTGCGCAGTTTGCGATGGTGCTGCCCCCATTTTCAGGAACAAACCGCTGGCGGTAATTGGTGGTGGGGATTCGGCTATGGAAGAAGCCACCTTCTTGACCAAGTATGGCTCTAAAGTTTATATCATTCACAGAAGGGATGTATTTAGAGCTTCCAAGATTATGCAGGGCAAAGCATTGAGTAATCCTAAAATTGAAGTGATATGGAACTCAACCGTCGTAGAAGCATATGGAGATTCATCCTTGAAGGGACTCAAGATAAAGAATGTTGCAACTGGCGACGTGTTTGATTTGAATGTTTCCGGATTGTTCTTTGCTATTGGACACGAGCCTGCAACGAAATTCTTGGATGGTCAGCTCGAACTCGATTCTGATGGCTACATTGTGACTAAGCCAGGGACCACAAAGACCAGTGTTGAGGGAGTTTTTGCTGCTGGGGATGTCCAGGACAAGAAGTATAGGCAAGCTATTACGGCGGCAGGATCTGGGTGCATGGCAGCTTTGGATGCTGAACATTACTTGCAGGAGGTTGGGTTTCAGGGGGCCAAGTCTCCATGA 1107 0.5023 MSPCPSAWKKLFTKACSLVGLGLATSFSSASSSSKLAAMDDLKILKTKLCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPEGIMGGELMDRCRKQSERFGTEIFTETVSKVDFSRRPFKVFTDSKTLEAESVIVATGAVAKRLPFPGSGDGPKGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSKVYIIHRRDVFRASKIMQGKALSNPKIEVIWNSTVVEAYGDSSLKGLKIKNVATGDVFDLNVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEVGFQGAKSP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 195 219 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 320 338 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 178 190 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 48 70 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 107 117 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 285 306 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 152 160 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 86 101 - -
Lele53g1201 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 247 263 - -
Lele53g1201 368 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 47 360 - -
Lele53g1201 368 Pfam Pyridine nucleotide-disulphide oxidoreductase 48 345 IPR023753 GO:0016491
Lele53g1201 368 Gene3D - 51 356 IPR036188 -
Lele53g1201 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 310 332 - -
Lele53g1201 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 199 217 - -
Lele53g1201 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 151 169 - -
Lele53g1201 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 283 299 - -
Lele53g1201 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 49 68 - -
Lele53g1201 368 FunFam Thioredoxin reductase 171 295 - -
Lele53g1201 368 SUPERFAMILY FAD/NAD(P)-binding domain 46 357 IPR036188 -
Lele53g1201 368 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 185 207 IPR008255 GO:0016491
Lele53g1201 368 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 48 357 IPR005982 GO:0004791|GO:0005737|GO:0019430
Lele53g1201 368 Gene3D - 167 295 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1201 Lele-ChrLele53 20794461 20796898 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0008 50 81199 87791 Lele53g1201 53 20794461 20796898 CCT
Lele51g0007 51 44621 54108 Lele53g1201 53 20794461 20796898 CCT
Lele53g1201 53 20794461 20796898 Lele56g0272 56 2114817 2135165 hybridization